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LINC02493 (long intergenic non-protein coding RNA 2493)

Identity

Other alias-
HGNC (Hugo) LINC02493
LocusID (NCBI) 101929123
Atlas_Id 79931
Location 4p15.32  [Link to chromosome band 4p15]
Location_base_pair Starts at 17171757 and ends at 17186057 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02493   53477
Cards
Entrez_Gene (NCBI)LINC02493  101929123  long intergenic non-protein coding RNA 2493
Aliases
GeneCards (Weizmann)LINC02493
Ensembl hg19 (Hinxton)ENSG00000250819 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250819 [Gene_View]  ENSG00000250819 [Sequence]  chr4:17171757-17186057 [Contig_View]  LINC02493 [Vega]
ICGC DataPortalENSG00000250819
TCGA cBioPortalLINC02493
AceView (NCBI)LINC02493
Genatlas (Paris)LINC02493
WikiGenes101929123
SOURCE (Princeton)LINC02493
Genetics Home Reference (NIH)LINC02493
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02493  -     chr4:17171757-17186057 -  4p15.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02493  -     4p15.32   [Description]    (hg19-Feb_2009)
EnsemblLINC02493 - 4p15.32 [CytoView hg19]  LINC02493 - 4p15.32 [CytoView hg38]
Mapping of homologs : NCBILINC02493 [Mapview hg19]  LINC02493 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC029598
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02493
Cluster EST : UnigeneHs.638913 [ NCBI ]
CGAP (NCI)Hs.638913
Alternative Splicing GalleryENSG00000250819
Gene ExpressionLINC02493 [ NCBI-GEO ]   LINC02493 [ EBI - ARRAY_EXPRESS ]   LINC02493 [ SEEK ]   LINC02493 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02493 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929123
GTEX Portal (Tissue expression)LINC02493
Human Protein AtlasENSG00000250819-LINC02493 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02493
DMDM Disease mutations101929123
Blocks (Seattle)LINC02493
Human Protein Atlas [tissue]ENSG00000250819-LINC02493 [tissue]
Protein Interaction databases
FunCoupENSG00000250819
BioGRIDLINC02493
STRING (EMBL)LINC02493
ZODIACLINC02493
Ontologies - Pathways
Huge Navigator LINC02493 [HugePedia]
snp3D : Map Gene to Disease101929123
BioCentury BCIQLINC02493
ClinGenLINC02493
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929123
Clinical trialLINC02493
Miscellaneous
canSAR (ICR)LINC02493 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02493
EVEXLINC02493
GoPubMedLINC02493
iHOPLINC02493
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:57 CEST 2018

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