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LINC02494 (long intergenic non-protein coding RNA 2494)

Identity

Other alias-
HGNC (Hugo) LINC02494
LocusID (NCBI) 105377671
Atlas_Id 79326
Location 4q13.1  [Link to chromosome band 4q13]
Location_base_pair Starts at 58524515 and ends at 58536328 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02494   53479
Cards
Entrez_Gene (NCBI)LINC02494  105377671  long intergenic non-protein coding RNA 2494
Aliases
GeneCards (Weizmann)LINC02494
Ensembl hg19 (Hinxton)ENSG00000250340 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250340 [Gene_View]  ENSG00000250340 [Sequence]  chr4:58524515-58536328 [Contig_View]  LINC02494 [Vega]
ICGC DataPortalENSG00000250340
TCGA cBioPortalLINC02494
AceView (NCBI)LINC02494
Genatlas (Paris)LINC02494
WikiGenes105377671
SOURCE (Princeton)LINC02494
Genetics Home Reference (NIH)LINC02494
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02494  -     chr4:58524515-58536328 -  4q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02494  -     4q13.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02494 - 4q13.1 [CytoView hg19]  LINC02494 - 4q13.1 [CytoView hg38]
Mapping of homologs : NCBILINC02494 [Mapview hg19]  LINC02494 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI873342 AW468836
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02494
Cluster EST : UnigeneHs.735429 [ NCBI ]
CGAP (NCI)Hs.735429
Alternative Splicing GalleryENSG00000250340
Gene ExpressionLINC02494 [ NCBI-GEO ]   LINC02494 [ EBI - ARRAY_EXPRESS ]   LINC02494 [ SEEK ]   LINC02494 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02494 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377671
GTEX Portal (Tissue expression)LINC02494
Human Protein AtlasENSG00000250340-LINC02494 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02494
DMDM Disease mutations105377671
Blocks (Seattle)LINC02494
Human Protein Atlas [tissue]ENSG00000250340-LINC02494 [tissue]
Protein Interaction databases
FunCoupENSG00000250340
BioGRIDLINC02494
STRING (EMBL)LINC02494
ZODIACLINC02494
Ontologies - Pathways
Huge Navigator LINC02494 [HugePedia]
snp3D : Map Gene to Disease105377671
BioCentury BCIQLINC02494
ClinGenLINC02494
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377671
Clinical trialLINC02494
Miscellaneous
canSAR (ICR)LINC02494 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02494
EVEXLINC02494
GoPubMedLINC02494
iHOPLINC02494
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:57 CEST 2018

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