Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02495 (long intergenic non-protein coding RNA 2495)

Identity

Other alias-
HGNC (Hugo) LINC02495
LocusID (NCBI) 285484
Atlas_Id 79610
Location 4p16.1  [Link to chromosome band 4p16]
Location_base_pair Starts at 6200733 and ends at 6233936 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02495   27728
Cards
Entrez_Gene (NCBI)LINC02495  285484  long intergenic non-protein coding RNA 2495
Aliases
GeneCards (Weizmann)LINC02495
Ensembl hg19 (Hinxton)ENSG00000249896 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249896 [Gene_View]  ENSG00000249896 [Sequence]  chr4:6200733-6233936 [Contig_View]  LINC02495 [Vega]
ICGC DataPortalENSG00000249896
TCGA cBioPortalLINC02495
AceView (NCBI)LINC02495
Genatlas (Paris)LINC02495
WikiGenes285484
SOURCE (Princeton)LINC02495
Genetics Home Reference (NIH)LINC02495
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02495  -     chr4:6200733-6233936 +  4p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02495  -     4p16.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02495 - 4p16.1 [CytoView hg19]  LINC02495 - 4p16.1 [CytoView hg38]
Mapping of homologs : NCBILINC02495 [Mapview hg19]  LINC02495 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091017
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02495
Cluster EST : UnigeneHs.479068 [ NCBI ]
CGAP (NCI)Hs.479068
Alternative Splicing GalleryENSG00000249896
Gene ExpressionLINC02495 [ NCBI-GEO ]   LINC02495 [ EBI - ARRAY_EXPRESS ]   LINC02495 [ SEEK ]   LINC02495 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02495 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)285484
GTEX Portal (Tissue expression)LINC02495
Human Protein AtlasENSG00000249896-LINC02495 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02495
DMDM Disease mutations285484
Blocks (Seattle)LINC02495
Human Protein Atlas [tissue]ENSG00000249896-LINC02495 [tissue]
IPIIPI00887191   
Protein Interaction databases
FunCoupENSG00000249896
BioGRIDLINC02495
STRING (EMBL)LINC02495
ZODIACLINC02495
Ontologies - Pathways
Huge Navigator LINC02495 [HugePedia]
snp3D : Map Gene to Disease285484
BioCentury BCIQLINC02495
ClinGenLINC02495
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285484
Clinical trialLINC02495
Miscellaneous
canSAR (ICR)LINC02495 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02495
EVEXLINC02495
GoPubMedLINC02495
iHOPLINC02495
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:57 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.