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LINC02497 (long intergenic non-protein coding RNA 2497)

Identity

Other alias-
HGNC (Hugo) LINC02497
LocusID (NCBI) 102723778
Atlas_Id 80106
Location 4p15.1  [Link to chromosome band 4p15]
Location_base_pair Starts at 31171144 and ends at 31211674 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02497   53482
Cards
Entrez_Gene (NCBI)LINC02497  102723778  long intergenic non-protein coding RNA 2497
Aliases
GeneCards (Weizmann)LINC02497
Ensembl hg19 (Hinxton)ENSG00000251182 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251182 [Gene_View]  ENSG00000251182 [Sequence]  chr4:31171144-31211674 [Contig_View]  LINC02497 [Vega]
ICGC DataPortalENSG00000251182
TCGA cBioPortalLINC02497
AceView (NCBI)LINC02497
Genatlas (Paris)LINC02497
WikiGenes102723778
SOURCE (Princeton)LINC02497
Genetics Home Reference (NIH)LINC02497
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02497  -     chr4:31171144-31211674 +  4p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02497  -     4p15.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02497 - 4p15.1 [CytoView hg19]  LINC02497 - 4p15.1 [CytoView hg38]
Mapping of homologs : NCBILINC02497 [Mapview hg19]  LINC02497 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI798927
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02497
Cluster EST : UnigeneHs.210739 [ NCBI ]
CGAP (NCI)Hs.210739
Alternative Splicing GalleryENSG00000251182
Gene ExpressionLINC02497 [ NCBI-GEO ]   LINC02497 [ EBI - ARRAY_EXPRESS ]   LINC02497 [ SEEK ]   LINC02497 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02497 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102723778
GTEX Portal (Tissue expression)LINC02497
Human Protein AtlasENSG00000251182-LINC02497 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02497
DMDM Disease mutations102723778
Blocks (Seattle)LINC02497
Human Protein Atlas [tissue]ENSG00000251182-LINC02497 [tissue]
Protein Interaction databases
FunCoupENSG00000251182
BioGRIDLINC02497
STRING (EMBL)LINC02497
ZODIACLINC02497
Ontologies - Pathways
Huge Navigator LINC02497 [HugePedia]
snp3D : Map Gene to Disease102723778
BioCentury BCIQLINC02497
ClinGenLINC02497
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102723778
Clinical trialLINC02497
Miscellaneous
canSAR (ICR)LINC02497 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02497
EVEXLINC02497
GoPubMedLINC02497
iHOPLINC02497
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:57 CEST 2018

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