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LINC02499 (long intergenic non-protein coding RNA 2499)

Identity

Other alias-
HGNC (Hugo) LINC02499
LocusID (NCBI) 728040
Atlas_Id 79717
Location 4q13.3  [Link to chromosome band 4q13]
Location_base_pair Starts at 73508803 and ends at 73528533 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02499   53484
Cards
Entrez_Gene (NCBI)LINC02499  728040  long intergenic non-protein coding RNA 2499
Aliases
GeneCards (Weizmann)LINC02499
Ensembl hg19 (Hinxton)ENSG00000250436 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250436 [Gene_View]  ENSG00000250436 [Sequence]  chr4:73508803-73528533 [Contig_View]  LINC02499 [Vega]
ICGC DataPortalENSG00000250436
TCGA cBioPortalLINC02499
AceView (NCBI)LINC02499
Genatlas (Paris)LINC02499
WikiGenes728040
SOURCE (Princeton)LINC02499
Genetics Home Reference (NIH)LINC02499
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02499  -     chr4:73508803-73528533 +  4q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02499  -     4q13.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02499 - 4q13.3 [CytoView hg19]  LINC02499 - 4q13.3 [CytoView hg38]
Mapping of homologs : NCBILINC02499 [Mapview hg19]  LINC02499 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CR745071
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02499
Cluster EST : UnigeneHs.640574 [ NCBI ]
CGAP (NCI)Hs.640574
Alternative Splicing GalleryENSG00000250436
Gene ExpressionLINC02499 [ NCBI-GEO ]   LINC02499 [ EBI - ARRAY_EXPRESS ]   LINC02499 [ SEEK ]   LINC02499 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02499 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728040
GTEX Portal (Tissue expression)LINC02499
Human Protein AtlasENSG00000250436-LINC02499 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02499
DMDM Disease mutations728040
Blocks (Seattle)LINC02499
Human Protein Atlas [tissue]ENSG00000250436-LINC02499 [tissue]
Protein Interaction databases
FunCoupENSG00000250436
BioGRIDLINC02499
STRING (EMBL)LINC02499
ZODIACLINC02499
Ontologies - Pathways
Huge Navigator LINC02499 [HugePedia]
snp3D : Map Gene to Disease728040
BioCentury BCIQLINC02499
ClinGenLINC02499
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728040
Clinical trialLINC02499
Miscellaneous
canSAR (ICR)LINC02499 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02499
EVEXLINC02499
GoPubMedLINC02499
iHOPLINC02499
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:57:58 CEST 2018

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