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LINC02504 (long intergenic non-protein coding RNA 2504)

Identity

Other alias-
HGNC (Hugo) LINC02504
LocusID (NCBI) 101928288
Atlas_Id 79158
Location 4q34.1  [Link to chromosome band 4q34]
Location_base_pair Starts at 171289493 and ends at 171298267 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02504   53493
Cards
Entrez_Gene (NCBI)LINC02504  101928288  long intergenic non-protein coding RNA 2504
Aliases
GeneCards (Weizmann)LINC02504
Ensembl hg19 (Hinxton)ENSG00000248339 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248339 [Gene_View]  ENSG00000248339 [Sequence]  chr4:171289493-171298267 [Contig_View]  LINC02504 [Vega]
ICGC DataPortalENSG00000248339
TCGA cBioPortalLINC02504
AceView (NCBI)LINC02504
Genatlas (Paris)LINC02504
WikiGenes101928288
SOURCE (Princeton)LINC02504
Genetics Home Reference (NIH)LINC02504
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02504  -     chr4:171289493-171298267 -  4q34.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02504  -     4q34.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02504 - 4q34.1 [CytoView hg19]  LINC02504 - 4q34.1 [CytoView hg38]
Mapping of homologs : NCBILINC02504 [Mapview hg19]  LINC02504 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL442080
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02504
Cluster EST : UnigeneHs.543371 [ NCBI ]
CGAP (NCI)Hs.543371
Alternative Splicing GalleryENSG00000248339
Gene ExpressionLINC02504 [ NCBI-GEO ]   LINC02504 [ EBI - ARRAY_EXPRESS ]   LINC02504 [ SEEK ]   LINC02504 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02504 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928288
GTEX Portal (Tissue expression)LINC02504
Human Protein AtlasENSG00000248339-LINC02504 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02504
DMDM Disease mutations101928288
Blocks (Seattle)LINC02504
Human Protein Atlas [tissue]ENSG00000248339-LINC02504 [tissue]
Protein Interaction databases
FunCoupENSG00000248339
BioGRIDLINC02504
STRING (EMBL)LINC02504
ZODIACLINC02504
Ontologies - Pathways
Huge Navigator LINC02504 [HugePedia]
snp3D : Map Gene to Disease101928288
BioCentury BCIQLINC02504
ClinGenLINC02504
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928288
Clinical trialLINC02504
Miscellaneous
canSAR (ICR)LINC02504 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02504
EVEXLINC02504
GoPubMedLINC02504
iHOPLINC02504
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:57:58 CEST 2018

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