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LINC02516 (long intergenic non-protein coding RNA 2516)

Identity

Other alias-
HGNC (Hugo) LINC02516
LocusID (NCBI) 101927087
Atlas_Id 80064
Location 4q28.1  [Link to chromosome band 4q28]
Location_base_pair Starts at 124499942 and ends at 124558434 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02516   53505
Cards
Entrez_Gene (NCBI)LINC02516  101927087  long intergenic non-protein coding RNA 2516
Aliases
GeneCards (Weizmann)LINC02516
Ensembl hg19 (Hinxton)ENSG00000261083 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261083 [Gene_View]  ENSG00000261083 [Sequence]  chr4:124499942-124558434 [Contig_View]  LINC02516 [Vega]
ICGC DataPortalENSG00000261083
TCGA cBioPortalLINC02516
AceView (NCBI)LINC02516
Genatlas (Paris)LINC02516
WikiGenes101927087
SOURCE (Princeton)LINC02516
Genetics Home Reference (NIH)LINC02516
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02516  -     chr4:124499942-124558434 -  4q28.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02516  -     4q28.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02516 - 4q28.1 [CytoView hg19]  LINC02516 - 4q28.1 [CytoView hg38]
Mapping of homologs : NCBILINC02516 [Mapview hg19]  LINC02516 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057455
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02516
Cluster EST : UnigeneHs.518966 [ NCBI ]
CGAP (NCI)Hs.518966
Alternative Splicing GalleryENSG00000261083
Gene ExpressionLINC02516 [ NCBI-GEO ]   LINC02516 [ EBI - ARRAY_EXPRESS ]   LINC02516 [ SEEK ]   LINC02516 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02516 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927087
GTEX Portal (Tissue expression)LINC02516
Human Protein AtlasENSG00000261083-LINC02516 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02516
DMDM Disease mutations101927087
Blocks (Seattle)LINC02516
Human Protein Atlas [tissue]ENSG00000261083-LINC02516 [tissue]
Protein Interaction databases
FunCoupENSG00000261083
BioGRIDLINC02516
STRING (EMBL)LINC02516
ZODIACLINC02516
Ontologies - Pathways
Huge Navigator LINC02516 [HugePedia]
snp3D : Map Gene to Disease101927087
BioCentury BCIQLINC02516
ClinGenLINC02516
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927087
Clinical trialLINC02516
Miscellaneous
canSAR (ICR)LINC02516 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02516
EVEXLINC02516
GoPubMedLINC02516
iHOPLINC02516
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:57:59 CEST 2018

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