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LINC02518 (long intergenic non-protein coding RNA 2518)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC02518
LocusID (NCBI) 105377957
Atlas_Id 80362
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 113428540 and ends at 113433447 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02518   53509
Cards
Entrez_Gene (NCBI)LINC02518  105377957  long intergenic non-protein coding RNA 2518
Aliases
GeneCards (Weizmann)LINC02518
Ensembl hg19 (Hinxton)ENSG00000232316 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232316 [Gene_View]  ENSG00000232316 [Sequence]  chr6:113428540-113433447 [Contig_View]  LINC02518 [Vega]
ICGC DataPortalENSG00000232316
TCGA cBioPortalLINC02518
AceView (NCBI)LINC02518
Genatlas (Paris)LINC02518
WikiGenes105377957
SOURCE (Princeton)LINC02518
Genetics Home Reference (NIH)LINC02518
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02518  -     chr6:113428540-113433447 -  6q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02518  -     6q21   [Description]    (hg19-Feb_2009)
GoldenPathLINC02518 - 6q21 [CytoView hg19]  LINC02518 - 6q21 [CytoView hg38]
ImmunoBaseENSG00000232316
genome Data Viewer NCBILINC02518 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI188093 DB236662
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02518
Alternative Splicing GalleryENSG00000232316
Gene ExpressionLINC02518 [ NCBI-GEO ]   LINC02518 [ EBI - ARRAY_EXPRESS ]   LINC02518 [ SEEK ]   LINC02518 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02518 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02518 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105377957
GTEX Portal (Tissue expression)LINC02518
Human Protein AtlasENSG00000232316-LINC02518 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02518
DMDM Disease mutations105377957
Blocks (Seattle)LINC02518
Human Protein Atlas [tissue]ENSG00000232316-LINC02518 [tissue]
Protein Interaction databases
FunCoupENSG00000232316
BioGRIDLINC02518
STRING (EMBL)LINC02518
ZODIACLINC02518
Ontologies - Pathways
Huge Navigator LINC02518 [HugePedia]
snp3D : Map Gene to Disease105377957
BioCentury BCIQLINC02518
ClinGenLINC02518
Clinical trials, drugs, therapy
Protein Interactions : CTD105377957
Clinical trialLINC02518
Miscellaneous
canSAR (ICR)LINC02518 (select the gene name)
HarmonizomeLINC02518
DataMed IndexLINC02518
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02518
EVEXLINC02518
GoPubMedLINC02518
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Aug 22 19:19:18 CEST 2020

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