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LINC02519 (long intergenic non-protein coding RNA 2519)

Identity

Other alias-
HGNC (Hugo) LINC02519
LocusID (NCBI) 105378147
Atlas_Id 80216
Location 6q27  [Link to chromosome band 6q27]
Location_base_pair Starts at 169373681 and ends at 169388385 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02519   53510
Cards
Entrez_Gene (NCBI)LINC02519  105378147  long intergenic non-protein coding RNA 2519
Aliases
GeneCards (Weizmann)LINC02519
Ensembl hg19 (Hinxton)ENSG00000226194 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226194 [Gene_View]  ENSG00000226194 [Sequence]  chr6:169373681-169388385 [Contig_View]  LINC02519 [Vega]
ICGC DataPortalENSG00000226194
TCGA cBioPortalLINC02519
AceView (NCBI)LINC02519
Genatlas (Paris)LINC02519
WikiGenes105378147
SOURCE (Princeton)LINC02519
Genetics Home Reference (NIH)LINC02519
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02519  -     chr6:169373681-169388385 -  6q27   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02519  -     6q27   [Description]    (hg19-Feb_2009)
EnsemblLINC02519 - 6q27 [CytoView hg19]  LINC02519 - 6q27 [CytoView hg38]
Mapping of homologs : NCBILINC02519 [Mapview hg19]  LINC02519 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055570
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02519
Cluster EST : UnigeneHs.549667 [ NCBI ]
CGAP (NCI)Hs.549667
Alternative Splicing GalleryENSG00000226194
Gene ExpressionLINC02519 [ NCBI-GEO ]   LINC02519 [ EBI - ARRAY_EXPRESS ]   LINC02519 [ SEEK ]   LINC02519 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02519 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378147
GTEX Portal (Tissue expression)LINC02519
Human Protein AtlasENSG00000226194-LINC02519 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02519
DMDM Disease mutations105378147
Blocks (Seattle)LINC02519
Human Protein Atlas [tissue]ENSG00000226194-LINC02519 [tissue]
Protein Interaction databases
FunCoupENSG00000226194
BioGRIDLINC02519
STRING (EMBL)LINC02519
ZODIACLINC02519
Ontologies - Pathways
Huge Navigator LINC02519 [HugePedia]
snp3D : Map Gene to Disease105378147
BioCentury BCIQLINC02519
ClinGenLINC02519
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378147
Clinical trialLINC02519
Miscellaneous
canSAR (ICR)LINC02519 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02519
EVEXLINC02519
GoPubMedLINC02519
iHOPLINC02519
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:59 CEST 2018

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