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LINC02525 (long intergenic non-protein coding RNA 2525)

Identity

Other alias-
HGNC (Hugo) LINC02525
LocusID (NCBI) 100507194
Atlas_Id 80133
Location 6p25.2  [Link to chromosome band 6p25]
Location_base_pair Starts at 3182818 and ends at 3195767 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02525   53545
Cards
Entrez_Gene (NCBI)LINC02525  100507194  long intergenic non-protein coding RNA 2525
Aliases
GeneCards (Weizmann)LINC02525
Ensembl hg19 (Hinxton)ENSG00000230269 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230269 [Gene_View]  ENSG00000230269 [Sequence]  chr6:3182818-3195767 [Contig_View]  LINC02525 [Vega]
ICGC DataPortalENSG00000230269
TCGA cBioPortalLINC02525
AceView (NCBI)LINC02525
Genatlas (Paris)LINC02525
WikiGenes100507194
SOURCE (Princeton)LINC02525
Genetics Home Reference (NIH)LINC02525
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02525  -     chr6:3182818-3195767 -  6p25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02525  -     6p25.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02525 - 6p25.2 [CytoView hg19]  LINC02525 - 6p25.2 [CytoView hg38]
Mapping of homologs : NCBILINC02525 [Mapview hg19]  LINC02525 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL528822 BC027024
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02525
Cluster EST : UnigeneHs.678053 [ NCBI ]
CGAP (NCI)Hs.678053
Alternative Splicing GalleryENSG00000230269
Gene ExpressionLINC02525 [ NCBI-GEO ]   LINC02525 [ EBI - ARRAY_EXPRESS ]   LINC02525 [ SEEK ]   LINC02525 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02525 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507194
GTEX Portal (Tissue expression)LINC02525
Human Protein AtlasENSG00000230269-LINC02525 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02525
DMDM Disease mutations100507194
Blocks (Seattle)LINC02525
Human Protein Atlas [tissue]ENSG00000230269-LINC02525 [tissue]
Protein Interaction databases
FunCoupENSG00000230269
BioGRIDLINC02525
STRING (EMBL)LINC02525
ZODIACLINC02525
Ontologies - Pathways
Huge Navigator LINC02525 [HugePedia]
snp3D : Map Gene to Disease100507194
BioCentury BCIQLINC02525
ClinGenLINC02525
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507194
Clinical trialLINC02525
Miscellaneous
canSAR (ICR)LINC02525 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02525
EVEXLINC02525
GoPubMedLINC02525
iHOPLINC02525
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:58:00 CEST 2018

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