Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02529 (long intergenic non-protein coding RNA 2529)

Identity

Other alias-
HGNC (Hugo) LINC02529
LocusID (NCBI) 102724053
Atlas_Id 79546
Location 6q25.3  [Link to chromosome band 6q25]
Location_base_pair Starts at 159383531 and ends at 159396441 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02529   53555
Cards
Entrez_Gene (NCBI)LINC02529  102724053  long intergenic non-protein coding RNA 2529
Aliases
GeneCards (Weizmann)LINC02529
Ensembl hg19 (Hinxton)ENSG00000234777 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234777 [Gene_View]  ENSG00000234777 [Sequence]  chr6:159383531-159396441 [Contig_View]  LINC02529 [Vega]
ICGC DataPortalENSG00000234777
TCGA cBioPortalLINC02529
AceView (NCBI)LINC02529
Genatlas (Paris)LINC02529
WikiGenes102724053
SOURCE (Princeton)LINC02529
Genetics Home Reference (NIH)LINC02529
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02529  -     chr6:159383531-159396441 +  6q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02529  -     6q25.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02529 - 6q25.3 [CytoView hg19]  LINC02529 - 6q25.3 [CytoView hg38]
Mapping of homologs : NCBILINC02529 [Mapview hg19]  LINC02529 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA437152
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02529
Cluster EST : UnigeneHs.98463 [ NCBI ]
CGAP (NCI)Hs.98463
Alternative Splicing GalleryENSG00000234777
Gene ExpressionLINC02529 [ NCBI-GEO ]   LINC02529 [ EBI - ARRAY_EXPRESS ]   LINC02529 [ SEEK ]   LINC02529 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02529 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724053
GTEX Portal (Tissue expression)LINC02529
Human Protein AtlasENSG00000234777-LINC02529 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02529
DMDM Disease mutations102724053
Blocks (Seattle)LINC02529
Human Protein Atlas [tissue]ENSG00000234777-LINC02529 [tissue]
Protein Interaction databases
FunCoupENSG00000234777
BioGRIDLINC02529
STRING (EMBL)LINC02529
ZODIACLINC02529
Ontologies - Pathways
Huge Navigator LINC02529 [HugePedia]
snp3D : Map Gene to Disease102724053
BioCentury BCIQLINC02529
ClinGenLINC02529
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724053
Clinical trialLINC02529
Miscellaneous
canSAR (ICR)LINC02529 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02529
EVEXLINC02529
GoPubMedLINC02529
iHOPLINC02529
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:58:00 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.