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LINC02532 (long intergenic non-protein coding RNA 2532)

Identity

Other alias-
HGNC (Hugo) LINC02532
LocusID (NCBI) 100422737
Atlas_Id 79614
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 106717452 and ends at 106787541 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02532   53549
Cards
Entrez_Gene (NCBI)LINC02532  100422737  long intergenic non-protein coding RNA 2532
Aliases
GeneCards (Weizmann)LINC02532
Ensembl hg19 (Hinxton)ENSG00000235142 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235142 [Gene_View]  ENSG00000235142 [Sequence]  chr6:106717452-106787541 [Contig_View]  LINC02532 [Vega]
ICGC DataPortalENSG00000235142
TCGA cBioPortalLINC02532
AceView (NCBI)LINC02532
Genatlas (Paris)LINC02532
WikiGenes100422737
SOURCE (Princeton)LINC02532
Genetics Home Reference (NIH)LINC02532
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02532  -     chr6:106717452-106787541 -  6q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02532  -     6q21   [Description]    (hg19-Feb_2009)
EnsemblLINC02532 - 6q21 [CytoView hg19]  LINC02532 - 6q21 [CytoView hg38]
Mapping of homologs : NCBILINC02532 [Mapview hg19]  LINC02532 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ420564 AK025967 AK123416 AK124400 BX116847
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02532
Cluster EST : UnigeneHs.729217 [ NCBI ]
CGAP (NCI)Hs.729217
Alternative Splicing GalleryENSG00000235142
Gene ExpressionLINC02532 [ NCBI-GEO ]   LINC02532 [ EBI - ARRAY_EXPRESS ]   LINC02532 [ SEEK ]   LINC02532 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02532 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422737
GTEX Portal (Tissue expression)LINC02532
Human Protein AtlasENSG00000235142-LINC02532 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02532
DMDM Disease mutations100422737
Blocks (Seattle)LINC02532
Human Protein Atlas [tissue]ENSG00000235142-LINC02532 [tissue]
IPIIPI00981475   
Protein Interaction databases
FunCoupENSG00000235142
BioGRIDLINC02532
STRING (EMBL)LINC02532
ZODIACLINC02532
Ontologies - Pathways
Huge Navigator LINC02532 [HugePedia]
snp3D : Map Gene to Disease100422737
BioCentury BCIQLINC02532
ClinGenLINC02532
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422737
Clinical trialLINC02532
Miscellaneous
canSAR (ICR)LINC02532 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02532
EVEXLINC02532
GoPubMedLINC02532
iHOPLINC02532
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:58:00 CEST 2018

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