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LINC02535 (long intergenic non-protein coding RNA 2535)

Identity

Other alias-
HGNC (Hugo) LINC02535
LocusID (NCBI) 101928820
Atlas_Id 79355
Location 6q14.3  [Link to chromosome band 6q14]
Location_base_pair Starts at 85387219 and ends at 85404802 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02535   53569
Cards
Entrez_Gene (NCBI)LINC02535  101928820  long intergenic non-protein coding RNA 2535
Aliases
GeneCards (Weizmann)LINC02535
Ensembl hg19 (Hinxton)ENSG00000234155 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234155 [Gene_View]  ENSG00000234155 [Sequence]  chr6:85387219-85404802 [Contig_View]  LINC02535 [Vega]
ICGC DataPortalENSG00000234155
TCGA cBioPortalLINC02535
AceView (NCBI)LINC02535
Genatlas (Paris)LINC02535
WikiGenes101928820
SOURCE (Princeton)LINC02535
Genetics Home Reference (NIH)LINC02535
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02535  -     chr6:85387219-85404802 -  6q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02535  -     6q14.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02535 - 6q14.3 [CytoView hg19]  LINC02535 - 6q14.3 [CytoView hg38]
Mapping of homologs : NCBILINC02535 [Mapview hg19]  LINC02535 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB371547 AK024998
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02535
Cluster EST : UnigeneHs.738392 [ NCBI ]
CGAP (NCI)Hs.738392
Alternative Splicing GalleryENSG00000234155
Gene ExpressionLINC02535 [ NCBI-GEO ]   LINC02535 [ EBI - ARRAY_EXPRESS ]   LINC02535 [ SEEK ]   LINC02535 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02535 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928820
GTEX Portal (Tissue expression)LINC02535
Human Protein AtlasENSG00000234155-LINC02535 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02535
DMDM Disease mutations101928820
Blocks (Seattle)LINC02535
Human Protein Atlas [tissue]ENSG00000234155-LINC02535 [tissue]
Protein Interaction databases
FunCoupENSG00000234155
BioGRIDLINC02535
STRING (EMBL)LINC02535
ZODIACLINC02535
Ontologies - Pathways
Huge Navigator LINC02535 [HugePedia]
snp3D : Map Gene to Disease101928820
BioCentury BCIQLINC02535
ClinGenLINC02535
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928820
Clinical trialLINC02535
Miscellaneous
canSAR (ICR)LINC02535 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02535
EVEXLINC02535
GoPubMedLINC02535
iHOPLINC02535
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:58:01 CEST 2018

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