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LINC02544 (long intergenic non-protein coding RNA 2544)

Identity

Other alias-
HGNC (Hugo) LINC02544
LocusID (NCBI) 101929504
Atlas_Id 79637
Location 6q27  [Link to chromosome band 6q27]
Location_base_pair Starts at 169175304 and ends at 169182740 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02544   53578
Cards
Entrez_Gene (NCBI)LINC02544  101929504  long intergenic non-protein coding RNA 2544
Aliases
GeneCards (Weizmann)LINC02544
Ensembl hg19 (Hinxton)ENSG00000261039 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261039 [Gene_View]  ENSG00000261039 [Sequence]  chr6:169175304-169182740 [Contig_View]  LINC02544 [Vega]
ICGC DataPortalENSG00000261039
TCGA cBioPortalLINC02544
AceView (NCBI)LINC02544
Genatlas (Paris)LINC02544
WikiGenes101929504
SOURCE (Princeton)LINC02544
Genetics Home Reference (NIH)LINC02544
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02544  -     chr6:169175304-169182740 -  6q27   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02544  -     6q27   [Description]    (hg19-Feb_2009)
EnsemblLINC02544 - 6q27 [CytoView hg19]  LINC02544 - 6q27 [CytoView hg38]
Mapping of homologs : NCBILINC02544 [Mapview hg19]  LINC02544 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF086258
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02544
Cluster EST : UnigeneHs.147721 [ NCBI ]
CGAP (NCI)Hs.147721
Alternative Splicing GalleryENSG00000261039
Gene ExpressionLINC02544 [ NCBI-GEO ]   LINC02544 [ EBI - ARRAY_EXPRESS ]   LINC02544 [ SEEK ]   LINC02544 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02544 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929504
GTEX Portal (Tissue expression)LINC02544
Human Protein AtlasENSG00000261039-LINC02544 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02544
DMDM Disease mutations101929504
Blocks (Seattle)LINC02544
Human Protein Atlas [tissue]ENSG00000261039-LINC02544 [tissue]
Protein Interaction databases
FunCoupENSG00000261039
BioGRIDLINC02544
STRING (EMBL)LINC02544
ZODIACLINC02544
Ontologies - Pathways
Huge Navigator LINC02544 [HugePedia]
snp3D : Map Gene to Disease101929504
BioCentury BCIQLINC02544
ClinGenLINC02544
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929504
Clinical trialLINC02544
Miscellaneous
canSAR (ICR)LINC02544 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02544
EVEXLINC02544
GoPubMedLINC02544
iHOPLINC02544
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:58:02 CEST 2018

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