Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC02545 (long intergenic non-protein coding RNA 2545)


Alias (NCBI)-
HGNC (Hugo) LINC02545
LocusID (NCBI) 105376561
Atlas_Id 80555
Location 11p15.2  [Link to chromosome band 11p15]
Location_base_pair Starts at 13844863 and ends at 13870616 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)LINC02545   53580
Entrez_Gene (NCBI)LINC02545    long intergenic non-protein coding RNA 2545
GeneCards (Weizmann)LINC02545
Ensembl hg19 (Hinxton)ENSG00000254930 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254930 [Gene_View]  ENSG00000254930 [Sequence]  chr11:13844863-13870616 [Contig_View]  LINC02545 [Vega]
ICGC DataPortalENSG00000254930
TCGA cBioPortalLINC02545
AceView (NCBI)LINC02545
Genatlas (Paris)LINC02545
SOURCE (Princeton)LINC02545
Genetics Home Reference (NIH)LINC02545
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02545  -     chr11:13844863-13870616 -  11p15.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02545  -     11p15.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC02545 - 11p15.2 [CytoView hg19]  LINC02545 - 11p15.2 [CytoView hg38]
genome Data Viewer NCBILINC02545 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI041524
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02545
Alternative Splicing GalleryENSG00000254930
Gene ExpressionLINC02545 [ NCBI-GEO ]   LINC02545 [ EBI - ARRAY_EXPRESS ]   LINC02545 [ SEEK ]   LINC02545 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02545 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02545 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105376561
GTEX Portal (Tissue expression)LINC02545
Human Protein AtlasENSG00000254930-LINC02545 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02545
Blocks (Seattle)LINC02545
Human Protein Atlas [tissue]ENSG00000254930-LINC02545 [tissue]
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:05:20 CET 2020

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