Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC02552 (long intergenic non-protein coding RNA 2552)


Alias (NCBI)-
HGNC (Hugo) LINC02552
LocusID (NCBI) 102723895
Atlas_Id 79284
Location 11q22.3  [Link to chromosome band 11q22]
Location_base_pair Starts at 104568489 and ends at 104609302 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)LINC02552   53587
Entrez_Gene (NCBI)LINC02552    long intergenic non-protein coding RNA 2552
GeneCards (Weizmann)LINC02552
Ensembl hg19 (Hinxton)ENSG00000256422 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000256422 [Gene_View]  ENSG00000256422 [Sequence]  chr11:104568489-104609302 [Contig_View]  LINC02552 [Vega]
ICGC DataPortalENSG00000256422
TCGA cBioPortalLINC02552
AceView (NCBI)LINC02552
Genatlas (Paris)LINC02552
SOURCE (Princeton)LINC02552
Genetics Home Reference (NIH)LINC02552
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02552  -     chr11:104568489-104609302 -  11q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02552  -     11q22.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC02552 - 11q22.3 [CytoView hg19]  LINC02552 - 11q22.3 [CytoView hg38]
genome Data Viewer NCBILINC02552 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)DA109127 N63497
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02552
Alternative Splicing GalleryENSG00000256422
Gene ExpressionLINC02552 [ NCBI-GEO ]   LINC02552 [ EBI - ARRAY_EXPRESS ]   LINC02552 [ SEEK ]   LINC02552 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02552 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02552 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102723895
GTEX Portal (Tissue expression)LINC02552
Human Protein AtlasENSG00000256422-LINC02552 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02552
Blocks (Seattle)LINC02552
Human Protein Atlas [tissue]ENSG00000256422-LINC02552 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:05:21 CET 2020

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