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LINC02554 (long intergenic non-protein coding RNA 2554)

Identity

Other alias-
HGNC (Hugo) LINC02554
LocusID (NCBI) 100507657
Atlas_Id 79948
Location 22q12.1  [Link to chromosome band 22q12]
Location_base_pair Starts at 27310651 and ends at 27317840 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02554   53594
Cards
Entrez_Gene (NCBI)LINC02554  100507657  long intergenic non-protein coding RNA 2554
Aliases
GeneCards (Weizmann)LINC02554
Ensembl hg19 (Hinxton)ENSG00000226741 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226741 [Gene_View]  chr22:27310651-27317840 [Contig_View]  LINC02554 [Vega]
ICGC DataPortalENSG00000226741
TCGA cBioPortalLINC02554
AceView (NCBI)LINC02554
Genatlas (Paris)LINC02554
WikiGenes100507657
SOURCE (Princeton)LINC02554
Genetics Home Reference (NIH)LINC02554
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02554  -     chr22:27310651-27317840 +  22q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02554  -     22q12.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02554 - 22q12.1 [CytoView hg19]  LINC02554 - 22q12.1 [CytoView hg38]
Mapping of homologs : NCBILINC02554 [Mapview hg19]  LINC02554 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX102824 CR627208 CR936633
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02554
Cluster EST : UnigeneHs.537371 [ NCBI ]
CGAP (NCI)Hs.537371
Alternative Splicing GalleryENSG00000226741
Gene ExpressionLINC02554 [ NCBI-GEO ]   LINC02554 [ EBI - ARRAY_EXPRESS ]   LINC02554 [ SEEK ]   LINC02554 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02554 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507657
GTEX Portal (Tissue expression)LINC02554
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02554
DMDM Disease mutations100507657
Blocks (Seattle)LINC02554
Human Protein AtlasENSG00000226741
Protein Interaction databases
FunCoupENSG00000226741
BioGRIDLINC02554
STRING (EMBL)LINC02554
ZODIACLINC02554
Ontologies - Pathways
Huge Navigator LINC02554 [HugePedia]
snp3D : Map Gene to Disease100507657
BioCentury BCIQLINC02554
ClinGenLINC02554
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507657
Clinical trialLINC02554
Miscellaneous
canSAR (ICR)LINC02554 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02554
EVEXLINC02554
GoPubMedLINC02554
iHOPLINC02554
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:16:38 CEST 2017

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