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LINC02561 (long intergenic non-protein coding RNA 2561)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC02561
LocusID (NCBI) 110806285
Atlas_Id 80623
Location 10p15.1  [Link to chromosome band 10p15]
Location_base_pair Starts at 5265989 and ends at 5271236 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)LINC02561   53601
Cards
Entrez_Gene (NCBI)LINC02561    long intergenic non-protein coding RNA 2561
Aliases
GeneCards (Weizmann)LINC02561
Ensembl hg19 (Hinxton)ENSG00000224034 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224034 [Gene_View]  ENSG00000224034 [Sequence]  chr10:5265989-5271236 [Contig_View]  LINC02561 [Vega]
ICGC DataPortalENSG00000224034
TCGA cBioPortalLINC02561
AceView (NCBI)LINC02561
Genatlas (Paris)LINC02561
SOURCE (Princeton)LINC02561
Genetics Home Reference (NIH)LINC02561
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02561  -     chr10:5265989-5271236 -  10p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02561  -     10p15.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC02561 - 10p15.1 [CytoView hg19]  LINC02561 - 10p15.1 [CytoView hg38]
ImmunoBaseENSG00000224034
genome Data Viewer NCBILINC02561 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BG170575
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02561
Alternative Splicing GalleryENSG00000224034
Gene ExpressionLINC02561 [ NCBI-GEO ]   LINC02561 [ EBI - ARRAY_EXPRESS ]   LINC02561 [ SEEK ]   LINC02561 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02561 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02561 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)110806285
GTEX Portal (Tissue expression)LINC02561
Human Protein AtlasENSG00000224034-LINC02561 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02561
Blocks (Seattle)LINC02561
Human Protein Atlas [tissue]ENSG00000224034-LINC02561 [tissue]
Protein Interaction databases
BioGRIDLINC02561
STRING (EMBL)LINC02561
ZODIACLINC02561
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02561
EVEXLINC02561
GoPubMedLINC02561
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:05:22 CET 2020

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