Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02564 (long intergenic non-protein coding RNA 2564)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC02564
LocusID (NCBI) 102724130
Atlas_Id 80273
Location 10p15.3  [Link to chromosome band 10p15]
Location_base_pair Starts at 11207 and ends at 15576 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)LINC02564   53604
Cards
Entrez_Gene (NCBI)LINC02564    long intergenic non-protein coding RNA 2564
Aliases
GeneCards (Weizmann)LINC02564
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:11207-15576 [Contig_View]  LINC02564 [Vega]
TCGA cBioPortalLINC02564
AceView (NCBI)LINC02564
Genatlas (Paris)LINC02564
SOURCE (Princeton)LINC02564
Genetics Home Reference (NIH)LINC02564
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02564  -     chr10:11207-15576 +  10p15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02564  -     10p15.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC02564 - 10p15.3 [CytoView hg19]  LINC02564 - 10p15.3 [CytoView hg38]
genome Data Viewer NCBILINC02564 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI807076
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02564
Gene ExpressionLINC02564 [ NCBI-GEO ]   LINC02564 [ EBI - ARRAY_EXPRESS ]   LINC02564 [ SEEK ]   LINC02564 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02564 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02564 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102724130
GTEX Portal (Tissue expression)LINC02564
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02564
Blocks (Seattle)LINC02564
Protein Interaction databases
BioGRIDLINC02564
STRING (EMBL)LINC02564
ZODIACLINC02564
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02564
EVEXLINC02564
GoPubMedLINC02564
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:05:23 CET 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.