Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC02565 (long intergenic non-protein coding RNA 2565)


Alias (NCBI)-
HGNC (Hugo) LINC02565
LocusID (NCBI) 105372138
Atlas_Id 80468
Location 18q21.31  [Link to chromosome band 18q21]
Location_base_pair Starts at 57169615 and ends at 57171194 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)LINC02565   53605
Entrez_Gene (NCBI)LINC02565    long intergenic non-protein coding RNA 2565
GeneCards (Weizmann)LINC02565
Ensembl hg19 (Hinxton)ENSG00000267726 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267726 [Gene_View]  ENSG00000267726 [Sequence]  chr18:57169615-57171194 [Contig_View]  LINC02565 [Vega]
ICGC DataPortalENSG00000267726
TCGA cBioPortalLINC02565
AceView (NCBI)LINC02565
Genatlas (Paris)LINC02565
SOURCE (Princeton)LINC02565
Genetics Home Reference (NIH)LINC02565
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02565  -     chr18:57169615-57171194 -  18q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02565  -     18q21.31   [Description]    (hg19-Feb_2009)
GoldenPathLINC02565 - 18q21.31 [CytoView hg19]  LINC02565 - 18q21.31 [CytoView hg38]
genome Data Viewer NCBILINC02565 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI078505 AI291405
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02565
Alternative Splicing GalleryENSG00000267726
Gene ExpressionLINC02565 [ NCBI-GEO ]   LINC02565 [ EBI - ARRAY_EXPRESS ]   LINC02565 [ SEEK ]   LINC02565 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02565 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02565 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105372138
GTEX Portal (Tissue expression)LINC02565
Human Protein AtlasENSG00000267726-LINC02565 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02565
Blocks (Seattle)LINC02565
Human Protein Atlas [tissue]ENSG00000267726-LINC02565 [tissue]
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:05:23 CET 2020

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