Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02565 (long intergenic non-protein coding RNA 2565)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC02565
LocusID (NCBI) 105372138
Atlas_Id 80468
Location 18q21.31  [Link to chromosome band 18q21]
Location_base_pair Starts at 57169615 and ends at 57171194 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)LINC02565   53605
Cards
Entrez_Gene (NCBI)LINC02565    long intergenic non-protein coding RNA 2565
Aliases
GeneCards (Weizmann)LINC02565
Ensembl hg19 (Hinxton)ENSG00000267726 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267726 [Gene_View]  ENSG00000267726 [Sequence]  chr18:57169615-57171194 [Contig_View]  LINC02565 [Vega]
ICGC DataPortalENSG00000267726
TCGA cBioPortalLINC02565
AceView (NCBI)LINC02565
Genatlas (Paris)LINC02565
SOURCE (Princeton)LINC02565
Genetics Home Reference (NIH)LINC02565
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02565  -     chr18:57169615-57171194 -  18q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02565  -     18q21.31   [Description]    (hg19-Feb_2009)
GoldenPathLINC02565 - 18q21.31 [CytoView hg19]  LINC02565 - 18q21.31 [CytoView hg38]
ImmunoBaseENSG00000267726
genome Data Viewer NCBILINC02565 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI078505 AI291405
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02565
Alternative Splicing GalleryENSG00000267726
Gene ExpressionLINC02565 [ NCBI-GEO ]   LINC02565 [ EBI - ARRAY_EXPRESS ]   LINC02565 [ SEEK ]   LINC02565 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02565 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02565 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105372138
GTEX Portal (Tissue expression)LINC02565
Human Protein AtlasENSG00000267726-LINC02565 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02565
Blocks (Seattle)LINC02565
Human Protein Atlas [tissue]ENSG00000267726-LINC02565 [tissue]
Protein Interaction databases
BioGRIDLINC02565
STRING (EMBL)LINC02565
ZODIACLINC02565
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02565
EVEXLINC02565
GoPubMedLINC02565
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:05:23 CET 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.