Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02569 (long intergenic non-protein coding RNA 2569)

Identity

Alias (NCBI)TCONS_00011283
HGNC (Hugo) LINC02569
LocusID (NCBI) 111082993
Atlas_Id 80356
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 30516266 and ends at 30519580 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)LINC02569   39760
Cards
Entrez_Gene (NCBI)LINC02569    long intergenic non-protein coding RNA 2569
AliasesTCONS_00011283
GeneCards (Weizmann)LINC02569
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:30516266-30519580 [Contig_View]  LINC02569 [Vega]
TCGA cBioPortalLINC02569
AceView (NCBI)LINC02569
Genatlas (Paris)LINC02569
SOURCE (Princeton)LINC02569
Genetics Home Reference (NIH)LINC02569
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02569  -     chr6:30516266-30519580 +  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02569  -     6p21.33   [Description]    (hg19-Feb_2009)
GoldenPathLINC02569 - 6p21.33 [CytoView hg19]  LINC02569 - 6p21.33 [CytoView hg38]
Genome Data Viewer NCBILINC02569 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BQ224945 BX102899 N29667
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02569
Gene ExpressionLINC02569 [ NCBI-GEO ]   LINC02569 [ EBI - ARRAY_EXPRESS ]   LINC02569 [ SEEK ]   LINC02569 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02569 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02569 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)111082993
GTEX Portal (Tissue expression)LINC02569
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02569
Protein Interaction databases
BioGRIDLINC02569
STRING (EMBL)LINC02569
ZODIACLINC02569
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC02569
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:00:43 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.