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LINC02574 (long intergenic non-protein coding RNA 2574)

Identity

Other alias-
HGNC (Hugo) LINC02574
LocusID (NCBI) 111216282
Atlas_Id 80570
Location 1p35.3  [Link to chromosome band 1p35]
Location_base_pair Starts at 27660328 and ends at 27662722 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02574   53746
Cards
Entrez_Gene (NCBI)LINC02574  111216282  long intergenic non-protein coding RNA 2574
Aliases
GeneCards (Weizmann)LINC02574
Ensembl hg19 (Hinxton)ENSG00000233975 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233975 [Gene_View]  ENSG00000233975 [Sequence]  chr1:27660328-27662722 [Contig_View]  LINC02574 [Vega]
ICGC DataPortalENSG00000233975
TCGA cBioPortalLINC02574
AceView (NCBI)LINC02574
Genatlas (Paris)LINC02574
WikiGenes111216282
SOURCE (Princeton)LINC02574
Genetics Home Reference (NIH)LINC02574
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02574  -     chr1:27660328-27662722 -  1p35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02574  -     1p35.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC02574 - 1p35.3 [CytoView hg19]  LINC02574 - 1p35.3 [CytoView hg38]
ImmunoBaseENSG00000233975
Mapping of homologs : NCBILINC02574 [Mapview hg19]  LINC02574 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW340488
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02574
Cluster EST : UnigeneHs.297628 [ NCBI ]
CGAP (NCI)Hs.297628
Alternative Splicing GalleryENSG00000233975
Gene ExpressionLINC02574 [ NCBI-GEO ]   LINC02574 [ EBI - ARRAY_EXPRESS ]   LINC02574 [ SEEK ]   LINC02574 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02574 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)111216282
GTEX Portal (Tissue expression)LINC02574
Human Protein AtlasENSG00000233975-LINC02574 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02574
DMDM Disease mutations111216282
Blocks (Seattle)LINC02574
Human Protein Atlas [tissue]ENSG00000233975-LINC02574 [tissue]
Protein Interaction databases
FunCoupENSG00000233975
BioGRIDLINC02574
STRING (EMBL)LINC02574
ZODIACLINC02574
Ontologies - Pathways
Huge Navigator LINC02574 [HugePedia]
snp3D : Map Gene to Disease111216282
BioCentury BCIQLINC02574
ClinGenLINC02574
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD111216282
Clinical trialLINC02574
Miscellaneous
canSAR (ICR)LINC02574 (select the gene name)
DataMed IndexLINC02574
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02574
EVEXLINC02574
GoPubMedLINC02574
iHOPLINC02574
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jun 7 17:26:22 CEST 2019

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