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LINP1 (lncRNA in non-homologous end joining pathway 1)

Identity

Alias (NCBI)-
HGNC (Hugo) LINP1
HGNC Alias namelncRNA in nonhomologous end joining (NHEJ) pathway 1
LocusID (NCBI) 108570035
Atlas_Id 56971
Location 10p14  [Link to chromosome band 10p14]
Location_base_pair Starts at 6737382 and ends at 6738939 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINP1   53170
Cards
Entrez_Gene (NCBI)LINP1  108570035  lncRNA in non-homologous end joining pathway 1
Aliases
GeneCards (Weizmann)LINP1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:6737382-6738939 [Contig_View]  LINP1 [Vega]
TCGA cBioPortalLINP1
AceView (NCBI)LINP1
Genatlas (Paris)LINP1
WikiGenes108570035
SOURCE (Princeton)LINP1
Genetics Home Reference (NIH)LINP1
Genomic and cartography
GoldenPath hg38 (UCSC)LINP1  -     chr10:6737382-6738939 +  10p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINP1  -     10p14   [Description]    (hg19-Feb_2009)
GoldenPathLINP1 - 10p14 [CytoView hg19]  LINP1 - 10p14 [CytoView hg38]
genome Data Viewer NCBILINP1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI761207 AW466961
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINP1
Gene ExpressionLINP1 [ NCBI-GEO ]   LINP1 [ EBI - ARRAY_EXPRESS ]   LINP1 [ SEEK ]   LINP1 [ MEM ]
Gene Expression Viewer (FireBrowse)LINP1 [ Firebrowse - Broad ]
GenevisibleExpression of LINP1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)108570035
GTEX Portal (Tissue expression)LINP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINP1
DMDM Disease mutations108570035
Blocks (Seattle)LINP1
Protein Interaction databases
BioGRIDLINP1
STRING (EMBL)LINP1
ZODIACLINP1
Ontologies - Pathways
Huge Navigator LINP1 [HugePedia]
snp3D : Map Gene to Disease108570035
BioCentury BCIQLINP1
ClinGenLINP1
Clinical trials, drugs, therapy
Protein Interactions : CTD108570035
Clinical trialLINP1
Miscellaneous
canSAR (ICR)LINP1 (select the gene name)
HarmonizomeLINP1
DataMed IndexLINP1
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINP1
EVEXLINP1
GoPubMedLINP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 14 14:18:09 CEST 2020

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