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LIPH (lipase, member H)

Identity

Other namesAH
ARWH2
LAH2
LPDLR
PLA1B
mPA-PLA1
HGNC (Hugo) LIPH
LocusID (NCBI) 200879
Location 3q27.2
Location_base_pair Starts at 185225570 and ends at 185270369 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)LIPH   18483
Entrez_Gene (NCBI)LIPH  200879  lipase, member H
Cards
GeneCards (Weizmann)LIPH
Ensembl (Hinxton)ENSG00000163898 [Gene_View]  chr3:185225570-185270369 [Contig_View]  LIPH [Vega]
AceView (NCBI)LIPH
Genatlas (Paris)LIPH
SOURCE (Stanford)NM_139248
Genomic and cartography
GoldenPath (UCSC)LIPH  -  3q27.2   chr3:185225570-185270369 -  3q27.2   [Description]    (hg19-Feb_2009)
EnsemblLIPH - 3q27.2 [CytoView]
Mapping of homologs : NCBILIPH [Mapview]
OMIM604379   607365   
Gene and transcription
Genbank (Entrez)AK074229 AK122651 AK298380 AY036912 AY093498
RefSeq transcript (SRS)NM_139248
RefSeq transcript (Entrez)NM_139248
RefSeq genomic (SRS)AC_000135 NC_000003 NC_018914 NG_012183 NT_005612 NW_001838884 NW_004078013
RefSeq genomic (Entrez)AC_000135 NC_000003 NC_018914 NG_012183 NT_005612 NW_001838884 NW_004078013
Consensus coding sequences : CCDS (NCBI)LIPH
Cluster EST : UnigeneHs.68864 [ SRS ] Hs.68864 [ NCBI ]
CGAP (NCI)Hs.68864
Alternative Splicing : Fast-db (Paris)GSHG0022292
Alternative Splicing GalleryENSG00000163898
Gene ExpressionLIPH [ NCBI-GEO ]   LIPH [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WWY8 (SRS) Q8WWY8 (Uniprot)
NextProtQ8WWY8
With graphics : InterProQ8WWY8
Splice isoforms : SwissVarQ8WWY8(Swissvar)
Domaine pattern : Prosite (SRS)LIPASE_SER (PS00120)   
Domaine pattern : Prosite (Expaxy)LIPASE_SER (PS00120)   
Domains : Interpro (SRS)Lipase    Lipase_N    Lipoprotein_lipase_LIPH   
Domains : Interpro (EBI)Lipase    Lipase_N    Lipoprotein_lipase_LIPH   
Related proteins : CluSTrQ8WWY8
Domain families : Pfam (SRS)Lipase (PF00151)   
Domain families : Pfam (Sanger)Lipase (PF00151)   
Domain families : Pfam (NCBI)pfam00151   
DMDM200879
Blocks (Seattle)Q8WWY8
Human Protein AtlasENSG00000163898
HPRD07392
IPIIPI00103480   IPI00828075   IPI00926326   IPI00926074   IPI00925893   
Protein Interaction databases
DIP (DOE-UCLA)Q8WWY8
IntAct (EBI)Q8WWY8
FunCoupENSG00000163898
REACTOMELIPH
Protein Interaction Database200879
BioGRIDLIPH
InParanoidQ8WWY8
Interologous Interaction database Q8WWY8
IntegromeDBLIPH
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)LIPH
SNP (GeneSNP Utah)LIPH
SNP : HGBaseLIPH
Genetic variants : HAPMAPLIPH
Somatic Mutations in Cancer : COSMICLIPH 
CONAN: Copy Number AnalysisLIPH 
Mutations and Diseases : HGMDLIPH
OMIM604379    607365   
GENETests604379    607365   
Disease Genetic AssociationLIPH
Huge Navigator LIPH [HugePedia]  LIPH [HugeCancerGEM]
Genomic VariantsLIPH  LIPH [DGVbeta]
snp3D : Map Gene to Disease200879
General knowledge
Homologs : HomoloGeneLIPH
Homology/Alignments : Family Browser (UCSC)LIPH
Phylogenetic Trees/Animal Genes : TreeFamLIPH
Catalytic activity : Enzyme3.1.1.- [ Enzyme-Expasy ]   3.1.1.- [ Enzyme-SRS ]   3.1.1.- [ IntEnz-EBI ]   3.1.1.- [ BRENDA ]   3.1.1.- [ KEGG ]   
Chemical/Protein Interactions : CTD200879
Chemical/Pharm GKB GenePA134934352
Clinical trialLIPH
Cancer Resource (Charite)ENSG00000163898
Ontology : AmiGOphospholipase activity  extracellular space  plasma membrane  heparin binding  lipid catabolic process  
Ontology : EGO-EBIphospholipase activity  extracellular space  plasma membrane  heparin binding  lipid catabolic process  
Other databases
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
PubGeneLIPH
iHOPLIPH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:45:29 CEST 2013
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