LITAF (lipopolysaccharide-induced TNF factor)

Identity

Other names	CMT1C
	FLJ38636
	MGC116698
	MGC116700
	MGC116701
	MGC125274
	MGC125275
	MGC125276
	PIG7
	SIMPLE
	TP53I7
HGNC	LITAF
Location	16p13.3-p12
Location_base_pair	Starts at 11549357 and ends at 11587730 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	LITAF   16841
Entrez_Gene	LITAF  9516  lipopolysaccharide-induced TNF factor
	Cards
GeneCards	LITAF
Ensembl	LITAF [Search_View]   ENSG00000189067 [Gene_View]
Genatlas	LITAF
GeneLynx	LITAF
eGenome	LITAF
euGene	9516
	Genomic and cartography
GoldenPath	LITAF  -     chr16:11549357-11587730 -  16p13.13   [Description]    (hg18-March_2006)
Ensembl	LITAF - 16p13.13 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	LITAF
	Gene and transcription
Genbank	AB034747 [ ENTREZ ]
Genbank	AF010312 [ ENTREZ ]
Genbank	AK095955 [ ENTREZ ]
Genbank	AK130788 [ ENTREZ ]
Genbank	AK314519 [ ENTREZ ]
RefSeq	NM_004862 [ SRS ]    NM_004862 [ ENTREZ ]
RefSeq	AC_000059 [ SRS ]    AC_000059 [ ENTREZ ]
RefSeq	AC_000148 [ SRS ]    AC_000148 [ ENTREZ ]
RefSeq	NC_000016 [ SRS ]    NC_000016 [ ENTREZ ]
RefSeq	NT_010393 [ SRS ]    NT_010393 [ ENTREZ ]
RefSeq	NW_001838343 [ SRS ]    NW_001838343 [ ENTREZ ]
RefSeq	NW_926018 [ SRS ]    NW_926018 [ ENTREZ ]
AceView	LITAF AceView - NCBI
Unigene	Hs.459940 [ SRS ]    Hs.459940 [ NCBI ]     HS459940 [ spliceNest ]
Fast-db	3601 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q99732 [ SRS]    Q99732 [ EXPASY ]     Q99732 [ INTERPRO ]     Q99732 [ UNIPROT ]
Interpro	IPR006629 LITAF [ SRS ]    IPR006629 LITAF [ EBI ]
CluSTr	Q99732
Smart	SM00714 LITAF [EMBL]
Blocks	Q99732
HPRD	10354
	Protein Interaction databases
DIP	Q99732
IntAct	Q99732
	Polymorphism : SNP, mutations, diseases
OMIM	601098;603795    [ map ]
GENECLINICS	601098;603795
SNP	LITAF [dbSNP-NCBI]
SNP	NM_004862 [SNP-NCI]
SNP	LITAF [GeneSNPs - Utah]  LITAF] [HGBASE - SRS]
HAPMAP	LITAF [HAPMAP]
COSMIC	LITAF [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	LITAF
	General knowledge
Family Browser	LITAF [UCSC Family Browser]
SOURCE	NM_004862
SMD	Hs.459940
SAGE	Hs.459940
GO	RNA polymerase II transcription factor activity [Amigo]  RNA polymerase II transcription factor activity
GO	signal transducer activity [Amigo]  signal transducer activity
GO	protein binding [Amigo]  protein binding
GO	lysosomal membrane [Amigo]  lysosomal membrane
GO	Golgi apparatus [Amigo]  Golgi apparatus
GO	transcription [Amigo]  transcription
GO	regulation of transcription from RNA polymerase II promoter [Amigo]  regulation of transcription from RNA polymerase II promoter
GO	apoptosis [Amigo]  apoptosis
GO	membrane [Amigo]  membrane
GO	positive regulation of I-kappaB kinase/NF-kappaB cascade [Amigo]  positive regulation of I-kappaB kinase/NF-kappaB cascade
GO	WW domain binding [Amigo]  WW domain binding
PubGene	LITAF
TreeFam	LITAF
CTD	9516 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	LITAF Related clones (RZPD - Berlin)
	PubMed
PubMed	22 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:48:40 2008