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LIVAR (liver cell viability associated lncRNA)

Identity

Alias_symbol (synonym)lnc18q22.2
Other alias
HGNC (Hugo) LIVAR
LocusID (NCBI) 102724895
Atlas_Id 79960
Location 18q22.2  [Link to chromosome band 18q22]
Location_base_pair Starts at 70335508 and ends at 70338180 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LIVAR   53130
Cards
Entrez_Gene (NCBI)LIVAR  102724895  liver cell viability associated lncRNA
Aliaseslnc18q22.2
GeneCards (Weizmann)LIVAR
Ensembl hg19 (Hinxton)ENSG00000266304 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000266304 [Gene_View]  chr18:70335508-70338180 [Contig_View]  LIVAR [Vega]
ICGC DataPortalENSG00000266304
TCGA cBioPortalLIVAR
AceView (NCBI)LIVAR
Genatlas (Paris)LIVAR
WikiGenes102724895
SOURCE (Princeton)LIVAR
Genetics Home Reference (NIH)LIVAR
Genomic and cartography
GoldenPath hg38 (UCSC)LIVAR  -     chr18:70335508-70338180 -  18q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LIVAR  -     18q22.2   [Description]    (hg19-Feb_2009)
EnsemblLIVAR - 18q22.2 [CytoView hg19]  LIVAR - 18q22.2 [CytoView hg38]
Mapping of homologs : NCBILIVAR [Mapview hg19]  LIVAR [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LIVAR
Alternative Splicing GalleryENSG00000266304
Gene ExpressionLIVAR [ NCBI-GEO ]   LIVAR [ EBI - ARRAY_EXPRESS ]   LIVAR [ SEEK ]   LIVAR [ MEM ]
Gene Expression Viewer (FireBrowse)LIVAR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102724895
GTEX Portal (Tissue expression)LIVAR
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LIVAR
DMDM Disease mutations102724895
Blocks (Seattle)LIVAR
Human Protein AtlasENSG00000266304
Protein Interaction databases
FunCoupENSG00000266304
BioGRIDLIVAR
STRING (EMBL)LIVAR
ZODIACLIVAR
Ontologies - Pathways
Huge Navigator LIVAR [HugePedia]
snp3D : Map Gene to Disease102724895
BioCentury BCIQLIVAR
ClinGenLIVAR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724895
Clinical trialLIVAR
Miscellaneous
canSAR (ICR)LIVAR (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLIVAR
EVEXLIVAR
GoPubMedLIVAR
iHOPLIVAR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:16:42 CEST 2017

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