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LIX1L-AS1 (LIX1L antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) LIX1L-AS1
LocusID (NCBI) 105371260
Atlas_Id 79310
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 145926831 and ends at 145941203 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LIX1L-AS1   41210
Cards
Entrez_Gene (NCBI)LIX1L-AS1  105371260  LIX1L antisense RNA 1
Aliases
GeneCards (Weizmann)LIX1L-AS1
Ensembl hg19 (Hinxton)ENSG00000234222 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234222 [Gene_View]  chr1:145926831-145941203 [Contig_View]  LIX1L-AS1 [Vega]
ICGC DataPortalENSG00000234222
TCGA cBioPortalLIX1L-AS1
AceView (NCBI)LIX1L-AS1
Genatlas (Paris)LIX1L-AS1
WikiGenes105371260
SOURCE (Princeton)LIX1L-AS1
Genetics Home Reference (NIH)LIX1L-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)LIX1L-AS1  -     chr1:145926831-145941203 +  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LIX1L-AS1  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblLIX1L-AS1 - 1q21.1 [CytoView hg19]  LIX1L-AS1 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBILIX1L-AS1 [Mapview hg19]  LIX1L-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BU567863 BU569132
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LIX1L-AS1
Cluster EST : UnigeneHs.603633 [ NCBI ]
CGAP (NCI)Hs.603633
Alternative Splicing GalleryENSG00000234222
Gene ExpressionLIX1L-AS1 [ NCBI-GEO ]   LIX1L-AS1 [ EBI - ARRAY_EXPRESS ]   LIX1L-AS1 [ SEEK ]   LIX1L-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)LIX1L-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105371260
GTEX Portal (Tissue expression)LIX1L-AS1
Human Protein AtlasENSG00000234222-LIX1L-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LIX1L-AS1
DMDM Disease mutations105371260
Blocks (Seattle)LIX1L-AS1
Human Protein Atlas [tissue]ENSG00000234222-LIX1L-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000234222
BioGRIDLIX1L-AS1
STRING (EMBL)LIX1L-AS1
ZODIACLIX1L-AS1
Ontologies - Pathways
Huge Navigator LIX1L-AS1 [HugePedia]
snp3D : Map Gene to Disease105371260
BioCentury BCIQLIX1L-AS1
ClinGenLIX1L-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105371260
Clinical trialLIX1L-AS1
Miscellaneous
canSAR (ICR)LIX1L-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLIX1L-AS1
EVEXLIX1L-AS1
GoPubMedLIX1L-AS1
iHOPLIX1L-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:01:17 CET 2017

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