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LMAN1L (lectin, mannose binding 1 like)

Identity

Alias_nameslectin
Alias_symbol (synonym)ERGL
ERGIC-53L
Other alias
HGNC (Hugo) LMAN1L
LocusID (NCBI) 79748
Atlas_Id 41164
Location 15q24.1  [Link to chromosome band 15q24]
Location_base_pair Starts at 74812853 and ends at 74825758 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LMAN1L   6632
Cards
Entrez_Gene (NCBI)LMAN1L  79748  lectin, mannose binding 1 like
AliasesERGIC-53L; ERGL
GeneCards (Weizmann)LMAN1L
Ensembl hg19 (Hinxton)ENSG00000140506 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000140506 [Gene_View]  chr15:74812853-74825758 [Contig_View]  LMAN1L [Vega]
ICGC DataPortalENSG00000140506
TCGA cBioPortalLMAN1L
AceView (NCBI)LMAN1L
Genatlas (Paris)LMAN1L
WikiGenes79748
SOURCE (Princeton)LMAN1L
Genetics Home Reference (NIH)LMAN1L
Genomic and cartography
GoldenPath hg38 (UCSC)LMAN1L  -     chr15:74812853-74825758 +  15q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LMAN1L  -     15q24.1   [Description]    (hg19-Feb_2009)
EnsemblLMAN1L - 15q24.1 [CytoView hg19]  LMAN1L - 15q24.1 [CytoView hg38]
Mapping of homologs : NCBILMAN1L [Mapview hg19]  LMAN1L [Mapview hg38]
OMIM609548   
Gene and transcription
Genbank (Entrez)AF303398 AK092591 AK291819 AK294807 AK300517
RefSeq transcript (Entrez)NM_021819
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LMAN1L
Cluster EST : UnigeneHs.620644 [ NCBI ]
CGAP (NCI)Hs.620644
Alternative Splicing GalleryENSG00000140506
Gene ExpressionLMAN1L [ NCBI-GEO ]   LMAN1L [ EBI - ARRAY_EXPRESS ]   LMAN1L [ SEEK ]   LMAN1L [ MEM ]
Gene Expression Viewer (FireBrowse)LMAN1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79748
GTEX Portal (Tissue expression)LMAN1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HAT1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HAT1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HAT1
Splice isoforms : SwissVarQ9HAT1
PhosPhoSitePlusQ9HAT1
Domaine pattern : Prosite (Expaxy)L_LECTIN_LIKE (PS51328)   
Domains : Interpro (EBI)ConA-like_dom    Lectin_leg   
Domain families : Pfam (Sanger)Lectin_leg-like (PF03388)   
Domain families : Pfam (NCBI)pfam03388   
Conserved Domain (NCBI)LMAN1L
DMDM Disease mutations79748
Blocks (Seattle)LMAN1L
SuperfamilyQ9HAT1
Human Protein AtlasENSG00000140506
Peptide AtlasQ9HAT1
HPRD17284
IPIIPI00430792   IPI00554502   IPI00910857   IPI00465335   IPI00383049   
Protein Interaction databases
DIP (DOE-UCLA)Q9HAT1
IntAct (EBI)Q9HAT1
FunCoupENSG00000140506
BioGRIDLMAN1L
STRING (EMBL)LMAN1L
ZODIACLMAN1L
Ontologies - Pathways
QuickGOQ9HAT1
Ontology : AmiGOintegral component of membrane  carbohydrate binding  endoplasmic reticulum-Golgi intermediate compartment membrane  
Ontology : EGO-EBIintegral component of membrane  carbohydrate binding  endoplasmic reticulum-Golgi intermediate compartment membrane  
Pathways : KEGGProtein processing in endoplasmic reticulum   
NDEx NetworkLMAN1L
Atlas of Cancer Signalling NetworkLMAN1L
Wikipedia pathwaysLMAN1L
Orthology - Evolution
OrthoDB79748
GeneTree (enSembl)ENSG00000140506
Phylogenetic Trees/Animal Genes : TreeFamLMAN1L
HOVERGENQ9HAT1
HOGENOMQ9HAT1
Homologs : HomoloGeneLMAN1L
Homology/Alignments : Family Browser (UCSC)LMAN1L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLMAN1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LMAN1L
dbVarLMAN1L
ClinVarLMAN1L
1000_GenomesLMAN1L 
Exome Variant ServerLMAN1L
ExAC (Exome Aggregation Consortium)LMAN1L (select the gene name)
Genetic variants : HAPMAP79748
Genomic Variants (DGV)LMAN1L [DGVbeta]
DECIPHERLMAN1L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisLMAN1L 
Mutations
ICGC Data PortalLMAN1L 
TCGA Data PortalLMAN1L 
Broad Tumor PortalLMAN1L
OASIS PortalLMAN1L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICLMAN1L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDLMAN1L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch LMAN1L
DgiDB (Drug Gene Interaction Database)LMAN1L
DoCM (Curated mutations)LMAN1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LMAN1L (select a term)
intoGenLMAN1L
Cancer3DLMAN1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609548   
Orphanet
MedgenLMAN1L
Genetic Testing Registry LMAN1L
NextProtQ9HAT1 [Medical]
TSGene79748
GENETestsLMAN1L
Target ValidationLMAN1L
Huge Navigator LMAN1L [HugePedia]
snp3D : Map Gene to Disease79748
BioCentury BCIQLMAN1L
ClinGenLMAN1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79748
Chemical/Pharm GKB GenePA30400
Clinical trialLMAN1L
Miscellaneous
canSAR (ICR)LMAN1L (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLMAN1L
EVEXLMAN1L
GoPubMedLMAN1L
iHOPLMAN1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:40:46 CEST 2017

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