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LMNA (lamin A/C)

Identity

Alias (NCBI)CDCD1
CDDC
CMD1A
CMT2B1
EMD2
FPL
FPLD
FPLD2
HGPS
IDC
LDP1
LFP
LGMD1B
LMN1
LMNC
LMNL1
MADA
PRO1
HGNC (Hugo) LMNA
HGNC Alias symbHGPS
MADA
HGNC Alias namemandibuloacral dysplasia type A
HGNC Previous nameLMN1
 CMD1A
 LGMD1B
 PRO1
 LMNL1
HGNC Previous namecardiomyopathy, dilated 1A (autosomal dominant)
 limb girdle muscular dystrophy 1B (autosomal dominant)
 progeria 1 (Hutchinson-Gilford type)
 lamin A/C-like 1
LocusID (NCBI) 4000
Atlas_Id 43997
Location 1q22  [Link to chromosome band 1q22]
Location_base_pair Starts at 156114670 and ends at 156140089 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ABCA6 (17q24.2) / LMNA (1q22)CIC (19q13.2) / LMNA (1q22)EIF4A2 (3q27.3) / LMNA (1q22)
FOS (14q24.3) / LMNA (1q22)KIF25-AS1 (6q27) / LMNA (1q22)LMNA (1q22) / ALK (2p23.2)
LMNA (1q22) / FOSB (19q13.32)LMNA (1q22) / GAP43 (3q13.31)LMNA (1q22) / LMNA (1q22)
LMNA (1q22) / MRAS (3q22.3)LMNA (1q22) / NTRK1 (1q23.1)LMNA (1q22) / RAB4B (19q13.2)
LMNA (1q22) / RAF1 (3p25.2)LMNA (1q22) / RCAN2 (6p21.1)LMNA (1q22) / SYT11 (1q22)
RCOR1 (14q32.31) / LMNA (1q22)SLC25A44 (1q22) / LMNA (1q22)UBC (12q24.31) / LMNA (1q22)
LMNA 1q22 / NTRK1 1q23.1CIC 19q13.2 / LMNA 1q22LMNA 1q22 / RAB4B 19q13.2
LMNA 1q22 / SYT11 1q22

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LMNA   6636
LRG (Locus Reference Genomic)LRG_254
Cards
Entrez_Gene (NCBI)LMNA    lamin A/C
AliasesCDCD1; CDDC; CMD1A; CMT2B1; 
EMD2; FPL; FPLD; FPLD2; HGPS; IDC; LDP1; LFP; LGMD1B; LMN1; LMNC; LMNL1; MADA; PRO1
GeneCards (Weizmann)LMNA
Ensembl hg19 (Hinxton)ENSG00000160789 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160789 [Gene_View]  ENSG00000160789 [Sequence]  chr1:156114670-156140089 [Contig_View]  LMNA [Vega]
ICGC DataPortalENSG00000160789
TCGA cBioPortalLMNA
AceView (NCBI)LMNA
Genatlas (Paris)LMNA
SOURCE (Princeton)LMNA
Genetics Home Reference (NIH)LMNA
Genomic and cartography
GoldenPath hg38 (UCSC)LMNA  -     chr1:156114670-156140089 +  1q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LMNA  -     1q22   [Description]    (hg19-Feb_2009)
GoldenPathLMNA - 1q22 [CytoView hg19]  LMNA - 1q22 [CytoView hg38]
ImmunoBaseENSG00000160789
Genome Data Viewer NCBILMNA [Mapview hg19]  
OMIM115200   150330   151660   176670   181350   212112   248370   275210   605588   610140   613205   616516   
Gene and transcription
Genbank (Entrez)AA558657 AF381029 AI872233 AK026584 AK056143
RefSeq transcript (Entrez)NM_001257374 NM_001282624 NM_001282625 NM_001282626 NM_005572 NM_170707 NM_170708
Consensus coding sequences : CCDS (NCBI)LMNA
Gene ExpressionLMNA [ NCBI-GEO ]   LMNA [ EBI - ARRAY_EXPRESS ]   LMNA [ SEEK ]   LMNA [ MEM ]
Gene Expression Viewer (FireBrowse)LMNA [ Firebrowse - Broad ]
GenevisibleExpression of LMNA in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4000
GTEX Portal (Tissue expression)LMNA
Human Protein AtlasENSG00000160789-LMNA [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LMNA
Human Protein Atlas [tissue]ENSG00000160789-LMNA [tissue]
HPRD01035
Protein Interaction databases
BioGRIDLMNA
STRING (EMBL)LMNA
ZODIACLMNA
Ontologies - Pathways
Litterature
PubMed499 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLMNA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:16:27 CEST 2021

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