Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LMO7DN-IT1 (LMO7DN intronic transcript 1)

Identity

Alias_namesC13orf45-IT1
C13orf45 intronic transcript 1
Alias_symbol (synonym)TCONS_00021569
Other alias
HGNC (Hugo) LMO7DN-IT1
LocusID (NCBI) 104326189
Atlas_Id 76622
Location 13q22.2  [Link to chromosome band 13q22]
Location_base_pair Starts at 76451022 and ends at 76455261 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LMO7DN-IT1   49790
Cards
Entrez_Gene (NCBI)LMO7DN-IT1  104326189  LMO7DN intronic transcript 1
AliasesC13orf45-IT1; TCONS_00021569
GeneCards (Weizmann)LMO7DN-IT1
Ensembl hg19 (Hinxton) [Gene_View]  chr13:76451022-76455261 [Contig_View]  LMO7DN-IT1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:76451022-76455261 [Contig_View]  LMO7DN-IT1 [Vega]
TCGA cBioPortalLMO7DN-IT1
AceView (NCBI)LMO7DN-IT1
Genatlas (Paris)LMO7DN-IT1
WikiGenes104326189
SOURCE (Princeton)LMO7DN-IT1
Genetics Home Reference (NIH)LMO7DN-IT1
Genomic and cartography
GoldenPath hg19 (UCSC)LMO7DN-IT1  -     chr13:76451022-76455261 +  13q22.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LMO7DN-IT1  -     13q22.2   [Description]    (hg38-Dec_2013)
EnsemblLMO7DN-IT1 - 13q22.2 [CytoView hg19]  LMO7DN-IT1 - 13q22.2 [CytoView hg38]
Mapping of homologs : NCBILMO7DN-IT1 [Mapview hg19]  LMO7DN-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI825938 HG505739
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)LMO7DN-IT1
Cluster EST : UnigeneHs.671216 [ NCBI ]
CGAP (NCI)Hs.671216
Gene ExpressionLMO7DN-IT1 [ NCBI-GEO ]   LMO7DN-IT1 [ EBI - ARRAY_EXPRESS ]   LMO7DN-IT1 [ SEEK ]   LMO7DN-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)LMO7DN-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104326189
GTEX Portal (Tissue expression)LMO7DN-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LMO7DN-IT1
DMDM Disease mutations104326189
Blocks (Seattle)LMO7DN-IT1
Protein Interaction databases
BioGRIDLMO7DN-IT1
STRING (EMBL)LMO7DN-IT1
ZODIACLMO7DN-IT1
Ontologies - Pathways
Huge Navigator LMO7DN-IT1 [HugePedia]
snp3D : Map Gene to Disease104326189
BioCentury BCIQLMO7DN-IT1
ClinGenLMO7DN-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104326189
Clinical trialLMO7DN-IT1
Miscellaneous
canSAR (ICR)LMO7DN-IT1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLMO7DN-IT1
EVEXLMO7DN-IT1
GoPubMedLMO7DN-IT1
iHOPLMO7DN-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:14:38 CET 2017

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