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LNCAROD (lncRNA activating regulator of DKK1)

Identity

Alias (NCBI)A-ROD
LINC01468
lnc-MBL2-4
HGNC (Hugo) LNCAROD
LocusID (NCBI) 101928687
Atlas_Id 80626
Location 10q21.1  [Link to chromosome band 10q21]
Location_base_pair Starts at 52450877 and ends at 52455272 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)LNCAROD   50913
Cards
Entrez_Gene (NCBI)LNCAROD    lncRNA activating regulator of DKK1
AliasesA-ROD; LINC01468; lnc-MBL2-4
GeneCards (Weizmann)LNCAROD
Ensembl hg19 (Hinxton)ENSG00000231131 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231131 [Gene_View]  ENSG00000231131 [Sequence]  chr10:52450877-52455272 [Contig_View]  LNCAROD [Vega]
ICGC DataPortalENSG00000231131
TCGA cBioPortalLNCAROD
AceView (NCBI)LNCAROD
Genatlas (Paris)LNCAROD
SOURCE (Princeton)LNCAROD
Genetics Home Reference (NIH)LNCAROD
Genomic and cartography
GoldenPath hg38 (UCSC)LNCAROD  -     chr10:52450877-52455272 -  10q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LNCAROD  -     10q21.1   [Description]    (hg19-Feb_2009)
GoldenPathLNCAROD - 10q21.1 [CytoView hg19]  LNCAROD - 10q21.1 [CytoView hg38]
ImmunoBaseENSG00000231131
genome Data Viewer NCBILNCAROD [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC015429 BF981308
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LNCAROD
Alternative Splicing GalleryENSG00000231131
Gene ExpressionLNCAROD [ NCBI-GEO ]   LNCAROD [ EBI - ARRAY_EXPRESS ]   LNCAROD [ SEEK ]   LNCAROD [ MEM ]
Gene Expression Viewer (FireBrowse)LNCAROD [ Firebrowse - Broad ]
GenevisibleExpression of LNCAROD in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101928687
GTEX Portal (Tissue expression)LNCAROD
Human Protein AtlasENSG00000231131-LNCAROD [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LNCAROD
Blocks (Seattle)LNCAROD
Human Protein Atlas [tissue]ENSG00000231131-LNCAROD [tissue]
Protein Interaction databases
BioGRIDLNCAROD
STRING (EMBL)LNCAROD
ZODIACLNCAROD
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLNCAROD
EVEXLNCAROD
GoPubMedLNCAROD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:05:38 CET 2020

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