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LOC100049716 (uncharacterized LOC100049716)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100049716
Atlas_Id 66152
Location 12p13.33  [Link to chromosome band 12p13]
Location_base_pair Starts at 630891 and ends at 645878 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100049716  100049716  uncharacterized LOC100049716
Aliases
GeneCards (Weizmann)LOC100049716
Ensembl hg19 (Hinxton)ENSG00000177406 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177406 [Gene_View]  chr12:630891-645878 [Contig_View]  LOC100049716 [Vega]
ICGC DataPortalENSG00000177406
TCGA cBioPortalLOC100049716
AceView (NCBI)LOC100049716
Genatlas (Paris)LOC100049716
WikiGenes100049716
SOURCE (Princeton)LOC100049716
Genetics Home Reference (NIH)LOC100049716
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100049716  -     chr12:630891-645878 +  12p13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100049716  -     12p13.33   [Description]    (hg19-Feb_2009)
EnsemblLOC100049716 - 12p13.33 [CytoView hg19]  LOC100049716 - 12p13.33 [CytoView hg38]
Mapping of homologs : NCBILOC100049716 [Mapview hg19]  LOC100049716 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056115 AK311371 BC033133 CD724311
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100049716
Cluster EST : UnigeneHs.655804 [ NCBI ]
CGAP (NCI)Hs.655804
Alternative Splicing GalleryENSG00000177406
Gene ExpressionLOC100049716 [ NCBI-GEO ]   LOC100049716 [ EBI - ARRAY_EXPRESS ]   LOC100049716 [ SEEK ]   LOC100049716 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100049716 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100049716
GTEX Portal (Tissue expression)LOC100049716
Human Protein AtlasENSG00000177406-LOC100049716 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100049716
DMDM Disease mutations100049716
Blocks (Seattle)LOC100049716
Human Protein Atlas [tissue]ENSG00000177406-LOC100049716 [tissue]
IPIIPI00166740   
Protein Interaction databases
FunCoupENSG00000177406
BioGRIDLOC100049716
STRING (EMBL)LOC100049716
ZODIACLOC100049716
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100049716
BioCentury BCIQLOC100049716
ClinGenLOC100049716
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100049716
Clinical trialLOC100049716
Miscellaneous
canSAR (ICR)LOC100049716 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100049716
EVEXLOC100049716
GoPubMedLOC100049716
iHOPLOC100049716
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:59:22 CET 2017

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