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LOC100128076 (protein tyrosine phosphatase pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100128076
Atlas_Id 66181
Location 9q22.31  [Link to chromosome band 9q22]
Location_base_pair Starts at 92132834 and ends at 92138629 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100128076  100128076  protein tyrosine phosphatase pseudogene
Aliases
GeneCards (Weizmann)LOC100128076
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:92132834-92138629 [Contig_View]  LOC100128076 [Vega]
TCGA cBioPortalLOC100128076
AceView (NCBI)LOC100128076
Genatlas (Paris)LOC100128076
WikiGenes100128076
SOURCE (Princeton)LOC100128076
Genetics Home Reference (NIH)LOC100128076
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100128076  -     chr9:92132834-92138629 +  9q22.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100128076  -     9q22.31   [Description]    (hg19-Feb_2009)
EnsemblLOC100128076 - 9q22.31 [CytoView hg19]  LOC100128076 - 9q22.31 [CytoView hg38]
Mapping of homologs : NCBILOC100128076 [Mapview hg19]  LOC100128076 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY786555
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100128076
Cluster EST : UnigeneHs.716275 [ NCBI ]
CGAP (NCI)Hs.716275
Gene ExpressionLOC100128076 [ NCBI-GEO ]   LOC100128076 [ EBI - ARRAY_EXPRESS ]   LOC100128076 [ SEEK ]   LOC100128076 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100128076 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100128076
GTEX Portal (Tissue expression)LOC100128076
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100128076
DMDM Disease mutations100128076
Blocks (Seattle)LOC100128076
Protein Interaction databases
BioGRIDLOC100128076
STRING (EMBL)LOC100128076
ZODIACLOC100128076
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100128076
BioCentury BCIQLOC100128076
ClinGenLOC100128076
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100128076
Clinical trialLOC100128076
Miscellaneous
canSAR (ICR)LOC100128076 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100128076
EVEXLOC100128076
GoPubMedLOC100128076
iHOPLOC100128076
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:46:22 CET 2017

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