Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100129027 (uncharacterized LOC100129027)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100129027
Atlas_Id 66260
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 45827841 and ends at 45836419 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100129027  100129027  uncharacterized LOC100129027
Aliases
GeneCards (Weizmann)LOC100129027
Ensembl hg19 (Hinxton)ENSG00000205424 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205424 [Gene_View]  chr21:45827841-45836419 [Contig_View]  LOC100129027 [Vega]
ICGC DataPortalENSG00000205424
TCGA cBioPortalLOC100129027
AceView (NCBI)LOC100129027
Genatlas (Paris)LOC100129027
WikiGenes100129027
SOURCE (Princeton)LOC100129027
Genetics Home Reference (NIH)LOC100129027
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100129027  -     chr21:45827841-45836419 -  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100129027  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100129027 - 21q22.3 [CytoView hg19]  LOC100129027 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBILOC100129027 [Mapview hg19]  LOC100129027 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123852
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100129027
Cluster EST : UnigeneHs.689591 [ NCBI ]
CGAP (NCI)Hs.689591
Alternative Splicing GalleryENSG00000205424
Gene ExpressionLOC100129027 [ NCBI-GEO ]   LOC100129027 [ EBI - ARRAY_EXPRESS ]   LOC100129027 [ SEEK ]   LOC100129027 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100129027 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129027
GTEX Portal (Tissue expression)LOC100129027
Human Protein AtlasENSG00000205424-LOC100129027 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100129027
DMDM Disease mutations100129027
Blocks (Seattle)LOC100129027
Human Protein Atlas [tissue]ENSG00000205424-LOC100129027 [tissue]
IPIIPI00446324   
Protein Interaction databases
FunCoupENSG00000205424
BioGRIDLOC100129027
STRING (EMBL)LOC100129027
ZODIACLOC100129027
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100129027
BioCentury BCIQLOC100129027
ClinGenLOC100129027
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129027
Clinical trialLOC100129027
Miscellaneous
canSAR (ICR)LOC100129027 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100129027
EVEXLOC100129027
GoPubMedLOC100129027
iHOPLOC100129027
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:42:48 CET 2017

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