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LOC100129138 (THAP domain containing, apoptosis associated protein 3 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100129138
Atlas_Id 66276
Location 1p21.1  [Link to chromosome band 1p21]
Location_base_pair Starts at 104073023 and ends at 104077071 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100129138  100129138  THAP domain containing, apoptosis associated protein 3 pseudogene
Aliases
GeneCards (Weizmann)LOC100129138
Ensembl hg19 (Hinxton)ENSG00000215869 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000215869 [Gene_View]  chr1:104073023-104077071 [Contig_View]  LOC100129138 [Vega]
ICGC DataPortalENSG00000215869
TCGA cBioPortalLOC100129138
AceView (NCBI)LOC100129138
Genatlas (Paris)LOC100129138
WikiGenes100129138
SOURCE (Princeton)LOC100129138
Genetics Home Reference (NIH)LOC100129138
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100129138  -     chr1:104073023-104077071 +  1p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100129138  -     1p21.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100129138 - 1p21.1 [CytoView hg19]  LOC100129138 - 1p21.1 [CytoView hg38]
Mapping of homologs : NCBILOC100129138 [Mapview hg19]  LOC100129138 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC014218
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100129138
Cluster EST : UnigeneHs.514487 [ NCBI ]
CGAP (NCI)Hs.514487
Alternative Splicing GalleryENSG00000215869
Gene ExpressionLOC100129138 [ NCBI-GEO ]   LOC100129138 [ EBI - ARRAY_EXPRESS ]   LOC100129138 [ SEEK ]   LOC100129138 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100129138 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129138
GTEX Portal (Tissue expression)LOC100129138
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100129138
DMDM Disease mutations100129138
Blocks (Seattle)LOC100129138
Human Protein AtlasENSG00000215869
IPIIPI00747777   
Protein Interaction databases
FunCoupENSG00000215869
BioGRIDLOC100129138
STRING (EMBL)LOC100129138
ZODIACLOC100129138
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100129138
BioCentury BCIQLOC100129138
ClinGenLOC100129138
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129138
Clinical trialLOC100129138
Miscellaneous
canSAR (ICR)LOC100129138 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100129138
EVEXLOC100129138
GoPubMedLOC100129138
iHOPLOC100129138
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 16:00:22 CEST 2017

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