Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100129216 (beta-defensin 131-like)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100129216
Atlas_Id 66284
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 71589499 and ends at 71595607 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100129216  100129216  beta-defensin 131-like
Aliases
GeneCards (Weizmann)LOC100129216
Ensembl hg19 (Hinxton)ENSG00000225805 [Gene_View]  chr11:71589499-71595607 [Contig_View]  LOC100129216 [Vega]
Ensembl hg38 (Hinxton)ENSG00000225805 [Gene_View]  chr11:71589499-71595607 [Contig_View]  LOC100129216 [Vega]
ICGC DataPortalENSG00000225805
TCGA cBioPortalLOC100129216
AceView (NCBI)LOC100129216
Genatlas (Paris)LOC100129216
WikiGenes100129216
SOURCE (Princeton)LOC100129216
Genetics Home Reference (NIH)LOC100129216
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100129216  -     chr11:71589499-71595607 +  11q13.4   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100129216  -     11q13.4   [Description]    (hg38-Dec_2013)
EnsemblLOC100129216 - 11q13.4 [CytoView hg19]  LOC100129216 - 11q13.4 [CytoView hg38]
Mapping of homologs : NCBILOC100129216 [Mapview hg19]  LOC100129216 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001242853
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_167190 NW_004929380
Consensus coding sequences : CCDS (NCBI)LOC100129216
Cluster EST : UnigeneHs.740246 [ NCBI ]
CGAP (NCI)Hs.740246
Alternative Splicing GalleryENSG00000225805
Gene ExpressionLOC100129216 [ NCBI-GEO ]   LOC100129216 [ EBI - ARRAY_EXPRESS ]   LOC100129216 [ SEEK ]   LOC100129216 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100129216 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129216
GTEX Portal (Tissue expression)LOC100129216
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100129216
DMDM Disease mutations100129216
Blocks (Seattle)LOC100129216
Human Protein AtlasENSG00000225805
Protein Interaction databases
FunCoupENSG00000225805
BioGRIDLOC100129216
STRING (EMBL)LOC100129216
ZODIACLOC100129216
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100129216
BioCentury BCIQLOC100129216
ClinGenLOC100129216
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129216
Clinical trialLOC100129216
Miscellaneous
canSAR (ICR)LOC100129216 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100129216
EVEXLOC100129216
GoPubMedLOC100129216
iHOPLOC100129216
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:15:08 CET 2017

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