Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100129291 (chromosome X open reading frame 49 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100129291
Atlas_Id 78678
Location Xq13.1  [Link to chromosome band Xq13]
Location_base_pair Starts at 71662991 and ends at 71666868 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100129291  100129291  chromosome X open reading frame 49 pseudogene
Aliases
GeneCards (Weizmann)LOC100129291
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:71662991-71666868 [Contig_View]  LOC100129291 [Vega]
TCGA cBioPortalLOC100129291
AceView (NCBI)LOC100129291
Genatlas (Paris)LOC100129291
WikiGenes100129291
SOURCE (Princeton)LOC100129291
Genetics Home Reference (NIH)LOC100129291
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100129291  -     chrX:71662991-71666868 -  Xq13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100129291  -     Xq13.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100129291 - Xq13.1 [CytoView hg19]  LOC100129291 - Xq13.1 [CytoView hg38]
Mapping of homologs : NCBILOC100129291 [Mapview hg19]  LOC100129291 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG201338 BX283792
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100129291
Cluster EST : UnigeneHs.558667 [ NCBI ]
CGAP (NCI)Hs.558667
Gene ExpressionLOC100129291 [ NCBI-GEO ]   LOC100129291 [ EBI - ARRAY_EXPRESS ]   LOC100129291 [ SEEK ]   LOC100129291 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100129291 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129291
GTEX Portal (Tissue expression)LOC100129291
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100129291
DMDM Disease mutations100129291
Blocks (Seattle)LOC100129291
Protein Interaction databases
BioGRIDLOC100129291
STRING (EMBL)LOC100129291
ZODIACLOC100129291
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100129291
BioCentury BCIQLOC100129291
ClinGenLOC100129291
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129291
Clinical trialLOC100129291
Miscellaneous
canSAR (ICR)LOC100129291 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100129291
EVEXLOC100129291
GoPubMedLOC100129291
iHOPLOC100129291
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:17:13 CEST 2017

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