Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100129307 (putative UPF0607 protein ENSP00000383144)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100129307
Atlas_Id 77735
Location 13q22.3  [Link to chromosome band 13q22]
Location_base_pair Starts at 77661374 and ends at 77662803 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100129307  100129307  putative UPF0607 protein ENSP00000383144
Aliases
GeneCards (Weizmann)LOC100129307
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:77661374-77662803 [Contig_View]  LOC100129307 [Vega]
TCGA cBioPortalLOC100129307
AceView (NCBI)LOC100129307
Genatlas (Paris)LOC100129307
WikiGenes100129307
SOURCE (Princeton)LOC100129307
Genetics Home Reference (NIH)LOC100129307
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100129307  -     chr13:77661374-77662803 -  13q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100129307  -     13q22.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100129307 - 13q22.3 [CytoView hg19]  LOC100129307 - 13q22.3 [CytoView hg38]
Mapping of homologs : NCBILOC100129307 [Mapview hg19]  LOC100129307 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001310140
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100129307
Gene ExpressionLOC100129307 [ NCBI-GEO ]   LOC100129307 [ EBI - ARRAY_EXPRESS ]   LOC100129307 [ SEEK ]   LOC100129307 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100129307 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129307
GTEX Portal (Tissue expression)LOC100129307
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100129307
DMDM Disease mutations100129307
Blocks (Seattle)LOC100129307
IPIIPI00872996   IPI00943555   
Protein Interaction databases
BioGRIDLOC100129307
STRING (EMBL)LOC100129307
ZODIACLOC100129307
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100129307
BioCentury BCIQLOC100129307
ClinGenLOC100129307
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129307
Clinical trialLOC100129307
Miscellaneous
canSAR (ICR)LOC100129307 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100129307
EVEXLOC100129307
GoPubMedLOC100129307
iHOPLOC100129307
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:46:46 CET 2017

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