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LOC100129534 (small nuclear ribonucleoprotein polypeptide N pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100129534
Atlas_Id 66319
Location 1p36.32  [Link to chromosome band 1p36]
Location_base_pair Starts at 2350415 and ends at 2352175 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100129534  100129534  small nuclear ribonucleoprotein polypeptide N pseudogene
Aliases
GeneCards (Weizmann)LOC100129534
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:2350415-2352175 [Contig_View]  LOC100129534 [Vega]
TCGA cBioPortalLOC100129534
AceView (NCBI)LOC100129534
Genatlas (Paris)LOC100129534
WikiGenes100129534
SOURCE (Princeton)LOC100129534
Genetics Home Reference (NIH)LOC100129534
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100129534  -     chr1:2350415-2352175 -  1p36.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100129534  -     1p36.32   [Description]    (hg19-Feb_2009)
EnsemblLOC100129534 - 1p36.32 [CytoView hg19]  LOC100129534 - 1p36.32 [CytoView hg38]
Mapping of homologs : NCBILOC100129534 [Mapview hg19]  LOC100129534 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC065369
RefSeq transcript (Entrez)NM_001127577
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100129534
Cluster EST : UnigeneHs.655313 [ NCBI ]
CGAP (NCI)Hs.655313
Gene ExpressionLOC100129534 [ NCBI-GEO ]   LOC100129534 [ EBI - ARRAY_EXPRESS ]   LOC100129534 [ SEEK ]   LOC100129534 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100129534 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129534
GTEX Portal (Tissue expression)LOC100129534
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100129534
DMDM Disease mutations100129534
Blocks (Seattle)LOC100129534
IPIIPI00439762   
Protein Interaction databases
BioGRIDLOC100129534
STRING (EMBL)LOC100129534
ZODIACLOC100129534
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100129534
BioCentury BCIQLOC100129534
ClinGenLOC100129534
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129534
Clinical trialLOC100129534
Miscellaneous
canSAR (ICR)LOC100129534 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100129534
EVEXLOC100129534
GoPubMedLOC100129534
iHOPLOC100129534
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:59:57 CET 2017

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