Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LOC100129540 (uncharacterized LOC100129540)


Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 100129540
Atlas_Id 79388
Location 15q25.1  [Link to chromosome band 15q25]
Location_base_pair Starts at 78978889 and ends at 78985926 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)-   -
Entrez_Gene (NCBI)LOC100129540    uncharacterized LOC100129540
GeneCards (Weizmann)LOC100129540
Ensembl hg19 (Hinxton)ENSG00000177699 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177699 [Gene_View]  ENSG00000177699 [Sequence]  chr15:78978889-78985926 [Contig_View]  LOC100129540 [Vega]
ICGC DataPortalENSG00000177699
TCGA cBioPortalLOC100129540
AceView (NCBI)LOC100129540
Genatlas (Paris)LOC100129540
SOURCE (Princeton)LOC100129540
Genetics Home Reference (NIH)LOC100129540
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100129540  -     chr15:78978889-78985926 +  15q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100129540  -     15q25.1   [Description]    (hg19-Feb_2009)
GoldenPathLOC100129540 - 15q25.1 [CytoView hg19]  LOC100129540 - 15q25.1 [CytoView hg38]
Genome Data Viewer NCBILOC100129540 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF370414 AK097337
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100129540
Gene ExpressionLOC100129540 [ NCBI-GEO ]   LOC100129540 [ EBI - ARRAY_EXPRESS ]   LOC100129540 [ SEEK ]   LOC100129540 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100129540 [ Firebrowse - Broad ]
GenevisibleExpression of LOC100129540 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100129540
GTEX Portal (Tissue expression)LOC100129540
Human Protein AtlasENSG00000177699-LOC100129540 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100129540
Human Protein Atlas [tissue]ENSG00000177699-LOC100129540 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:01:10 CEST 2021

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