Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100129550 (uncharacterized LOC100129550)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100129550
Atlas_Id 66320
Location 3q21.1  [Link to chromosome band 3q21]
Location_base_pair Starts at 122605360 and ends at 122611263 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100129550  100129550  uncharacterized LOC100129550
Aliases
GeneCards (Weizmann)LOC100129550
Ensembl hg19 (Hinxton)ENSG00000273033 [Gene_View]  chr3:122605360-122611263 [Contig_View]  LOC100129550 [Vega]
Ensembl hg38 (Hinxton)ENSG00000273033 [Gene_View]  chr3:122605360-122611263 [Contig_View]  LOC100129550 [Vega]
ICGC DataPortalENSG00000273033
TCGA cBioPortalLOC100129550
AceView (NCBI)LOC100129550
Genatlas (Paris)LOC100129550
WikiGenes100129550
SOURCE (Princeton)LOC100129550
Genetics Home Reference (NIH)LOC100129550
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100129550  -     chr3:122605360-122611263 +  3q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100129550  -     3q21.1   [Description]    (hg38-Dec_2013)
EnsemblLOC100129550 - 3q21.1 [CytoView hg19]  LOC100129550 - 3q21.1 [CytoView hg38]
Mapping of homologs : NCBILOC100129550 [Mapview hg19]  LOC100129550 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK127315 BQ016161 BX471201 BX490907 HG495994
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)LOC100129550
Cluster EST : UnigeneHs.61558 [ NCBI ]
CGAP (NCI)Hs.61558
Alternative Splicing GalleryENSG00000273033
Gene ExpressionLOC100129550 [ NCBI-GEO ]   LOC100129550 [ EBI - ARRAY_EXPRESS ]   LOC100129550 [ SEEK ]   LOC100129550 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100129550 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129550
GTEX Portal (Tissue expression)LOC100129550
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100129550
DMDM Disease mutations100129550
Blocks (Seattle)LOC100129550
Human Protein AtlasENSG00000273033
Protein Interaction databases
FunCoupENSG00000273033
BioGRIDLOC100129550
STRING (EMBL)LOC100129550
ZODIACLOC100129550
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100129550
BioCentury BCIQLOC100129550
ClinGenLOC100129550
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129550
Clinical trialLOC100129550
Miscellaneous
canSAR (ICR)LOC100129550 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100129550
EVEXLOC100129550
GoPubMedLOC100129550
iHOPLOC100129550
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:15:16 CET 2017

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