Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100129935 (lectin, galactoside binding soluble 14 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100129935
Atlas_Id 66347
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 39638685 and ends at 39642401 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100129935  100129935  lectin, galactoside binding soluble 14 pseudogene
Aliases
GeneCards (Weizmann)LOC100129935
Ensembl hg19 (Hinxton)ENSG00000268153 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000268153 [Gene_View]  chr19:39638685-39642401 [Contig_View]  LOC100129935 [Vega]
ICGC DataPortalENSG00000268153
TCGA cBioPortalLOC100129935
AceView (NCBI)LOC100129935
Genatlas (Paris)LOC100129935
WikiGenes100129935
SOURCE (Princeton)LOC100129935
Genetics Home Reference (NIH)LOC100129935
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100129935  -     chr19:39638685-39642401 +  19q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100129935  -     19q13.2   [Description]    (hg19-Feb_2009)
EnsemblLOC100129935 - 19q13.2 [CytoView hg19]  LOC100129935 - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBILOC100129935 [Mapview hg19]  LOC100129935 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK023628
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100129935
Cluster EST : UnigeneHs.659307 [ NCBI ]
CGAP (NCI)Hs.659307
Alternative Splicing GalleryENSG00000268153
Gene ExpressionLOC100129935 [ NCBI-GEO ]   LOC100129935 [ EBI - ARRAY_EXPRESS ]   LOC100129935 [ SEEK ]   LOC100129935 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100129935 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129935
GTEX Portal (Tissue expression)LOC100129935
Human Protein AtlasENSG00000268153-LOC100129935 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100129935
DMDM Disease mutations100129935
Blocks (Seattle)LOC100129935
Human Protein Atlas [tissue]ENSG00000268153-LOC100129935 [tissue]
Protein Interaction databases
FunCoupENSG00000268153
BioGRIDLOC100129935
STRING (EMBL)LOC100129935
ZODIACLOC100129935
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100129935
BioCentury BCIQLOC100129935
ClinGenLOC100129935
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129935
Clinical trialLOC100129935
Miscellaneous
canSAR (ICR)LOC100129935 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100129935
EVEXLOC100129935
GoPubMedLOC100129935
iHOPLOC100129935
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:46:58 CET 2017

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