Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100129940 (uncharacterized LOC100129940)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100129940
Atlas_Id 66350
Location 12q14.3  [Link to chromosome band 12q14]
Location_base_pair Starts at 65855947 and ends at 65882167 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100129940  100129940  uncharacterized LOC100129940
Aliases
GeneCards (Weizmann)LOC100129940
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:65855947-65882167 [Contig_View]  LOC100129940 [Vega]
TCGA cBioPortalLOC100129940
AceView (NCBI)LOC100129940
Genatlas (Paris)LOC100129940
WikiGenes100129940
SOURCE (Princeton)LOC100129940
Genetics Home Reference (NIH)LOC100129940
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100129940  -     chr12:65855947-65882167 -  12q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100129940  -     12q14.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100129940 - 12q14.3 [CytoView hg19]  LOC100129940 - 12q14.3 [CytoView hg38]
Mapping of homologs : NCBILOC100129940 [Mapview hg19]  LOC100129940 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128707 AY387665 BI762425
RefSeq transcript (Entrez)NM_001292023 NM_001292024
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100129940
Cluster EST : UnigeneHs.726942 [ NCBI ]
CGAP (NCI)Hs.726942
Gene ExpressionLOC100129940 [ NCBI-GEO ]   LOC100129940 [ EBI - ARRAY_EXPRESS ]   LOC100129940 [ SEEK ]   LOC100129940 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100129940 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129940
GTEX Portal (Tissue expression)LOC100129940
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100129940
DMDM Disease mutations100129940
Blocks (Seattle)LOC100129940
IPIIPI01010607   IPI00443543   IPI01009741   
Protein Interaction databases
BioGRIDLOC100129940
STRING (EMBL)LOC100129940
ZODIACLOC100129940
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100129940
BioCentury BCIQLOC100129940
ClinGenLOC100129940
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129940
Clinical trialLOC100129940
Miscellaneous
canSAR (ICR)LOC100129940 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100129940
EVEXLOC100129940
GoPubMedLOC100129940
iHOPLOC100129960
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:46:59 CET 2017

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