Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC100130093 (uncharacterized LOC100130093)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100130093
Atlas_Id 66360
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 227916240 and ends at 227922055 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100130093  100130093  uncharacterized LOC100130093
Aliases
GeneCards (Weizmann)LOC100130093
Ensembl hg19 (Hinxton)ENSG00000143740 [Gene_View]  chr1:227916240-227922055 [Contig_View]  LOC100130093 [Vega]
Ensembl hg38 (Hinxton)ENSG00000143740 [Gene_View]  chr1:227916240-227922055 [Contig_View]  LOC100130093 [Vega]
ICGC DataPortalENSG00000143740
TCGA cBioPortalLOC100130093
AceView (NCBI)LOC100130093
Genatlas (Paris)LOC100130093
WikiGenes100130093
SOURCE (Princeton)LOC100130093
Genetics Home Reference (NIH)LOC100130093
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100130093  -     chr1:227916240-227922055 +  1q42.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100130093  -     1q42.13   [Description]    (hg38-Dec_2013)
EnsemblLOC100130093 - 1q42.13 [CytoView hg19]  LOC100130093 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBILOC100130093 [Mapview hg19]  LOC100130093 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF370397 AK055266 AK093736 BC067081
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_167186 NW_004929294
Consensus coding sequences : CCDS (NCBI)LOC100130093
Cluster EST : UnigeneHs.745334 [ NCBI ]
CGAP (NCI)Hs.745334
Alternative Splicing GalleryENSG00000143740
Gene ExpressionLOC100130093 [ NCBI-GEO ]   LOC100130093 [ EBI - ARRAY_EXPRESS ]   LOC100130093 [ SEEK ]   LOC100130093 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100130093 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100130093
GTEX Portal (Tissue expression)LOC100130093
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100130093
DMDM Disease mutations100130093
Blocks (Seattle)LOC100130093
Human Protein AtlasENSG00000143740
IPIIPI00435946   
Protein Interaction databases
FunCoupENSG00000143740
BioGRIDLOC100130093
STRING (EMBL)LOC100130093
ZODIACLOC100130093
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100130093
BioCentury BCIQLOC100130093
ClinGenLOC100130093
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100130093
Clinical trialLOC100130093
Miscellaneous
canSAR (ICR)LOC100130093 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100130093
EVEXLOC100130093
GoPubMedLOC100130093
iHOPLOC100130093
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:15:24 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.