Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100130476 (uncharacterized LOC100130476)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100130476
Atlas_Id 57055
Location 6q23.3  [Link to chromosome band 6q23]
Location_base_pair Starts at 137823670 and ends at 137868233 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100130476  100130476  uncharacterized LOC100130476
Aliases
GeneCards (Weizmann)LOC100130476
Ensembl hg19 (Hinxton)ENSG00000237499 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237499 [Gene_View]  ENSG00000237499 [Sequence]  chr6:137823670-137868233 [Contig_View]  LOC100130476 [Vega]
ICGC DataPortalENSG00000237499
TCGA cBioPortalLOC100130476
AceView (NCBI)LOC100130476
Genatlas (Paris)LOC100130476
WikiGenes100130476
SOURCE (Princeton)LOC100130476
Genetics Home Reference (NIH)LOC100130476
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100130476  -     chr6:137823670-137868233 -  6q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100130476  -     6q23.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100130476 - 6q23.3 [CytoView hg19]  LOC100130476 - 6q23.3 [CytoView hg38]
Mapping of homologs : NCBILOC100130476 [Mapview hg19]  LOC100130476 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124173
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100130476
Cluster EST : UnigeneHs.598050 [ NCBI ]
CGAP (NCI)Hs.598050
Alternative Splicing GalleryENSG00000237499
Gene ExpressionLOC100130476 [ NCBI-GEO ]   LOC100130476 [ EBI - ARRAY_EXPRESS ]   LOC100130476 [ SEEK ]   LOC100130476 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100130476 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100130476
GTEX Portal (Tissue expression)LOC100130476
Human Protein AtlasENSG00000237499-LOC100130476 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100130476
DMDM Disease mutations100130476
Blocks (Seattle)LOC100130476
Human Protein Atlas [tissue]ENSG00000237499-LOC100130476 [tissue]
IPIIPI00886730   
Protein Interaction databases
FunCoupENSG00000237499
BioGRIDLOC100130476
STRING (EMBL)LOC100130476
ZODIACLOC100130476
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100130476
BioCentury BCIQLOC100130476
ClinGenLOC100130476
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100130476
Clinical trialLOC100130476
Miscellaneous
canSAR (ICR)LOC100130476 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100130476
EVEXLOC100130476
GoPubMedLOC100130476
iHOPLOC100130476
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:17:06 CET 2018

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