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LOC100130849 (phosphorylase kinase gamma subunit 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100130849
Atlas_Id 66432
Location 7p11.2  [Link to chromosome band 7p11]
Location_base_pair Starts at 56875385 and ends at 56882146 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100130849  100130849  phosphorylase kinase gamma subunit 1 pseudogene
Aliases
GeneCards (Weizmann)LOC100130849
Ensembl hg19 (Hinxton)ENSG00000233437 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233437 [Gene_View]  chr7:56875385-56882146 [Contig_View]  LOC100130849 [Vega]
ICGC DataPortalENSG00000233437
TCGA cBioPortalLOC100130849
AceView (NCBI)LOC100130849
Genatlas (Paris)LOC100130849
WikiGenes100130849
SOURCE (Princeton)LOC100130849
Genetics Home Reference (NIH)LOC100130849
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100130849  -     chr7:56875385-56882146 -  7p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100130849  -     7p11.2   [Description]    (hg19-Feb_2009)
EnsemblLOC100130849 - 7p11.2 [CytoView hg19]  LOC100130849 - 7p11.2 [CytoView hg38]
Mapping of homologs : NCBILOC100130849 [Mapview hg19]  LOC100130849 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB024168 DQ585969
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100130849
Cluster EST : UnigeneHs.568145 [ NCBI ]
CGAP (NCI)Hs.568145
Alternative Splicing GalleryENSG00000233437
Gene ExpressionLOC100130849 [ NCBI-GEO ]   LOC100130849 [ EBI - ARRAY_EXPRESS ]   LOC100130849 [ SEEK ]   LOC100130849 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100130849 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100130849
GTEX Portal (Tissue expression)LOC100130849
Human Protein AtlasENSG00000233437-LOC100130849 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100130849
DMDM Disease mutations100130849
Blocks (Seattle)LOC100130849
Human Protein Atlas [tissue]ENSG00000233437-LOC100130849 [tissue]
Protein Interaction databases
FunCoupENSG00000233437
BioGRIDLOC100130849
STRING (EMBL)LOC100130849
ZODIACLOC100130849
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100130849
BioCentury BCIQLOC100130849
ClinGenLOC100130849
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100130849
Clinical trialLOC100130849
Miscellaneous
canSAR (ICR)LOC100130849 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100130849
EVEXLOC100130849
GoPubMedLOC100130849
iHOPLOC100130849
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:47:16 CET 2017

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