Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100130872 (uncharacterized LOC100130872)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100130872
Atlas_Id 66436
Location 4p16.3  [Link to chromosome band 4p16]
Location_base_pair Starts at 1195783 and ends at 1208962 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100130872  100130872  uncharacterized LOC100130872
Aliases
GeneCards (Weizmann)LOC100130872
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:1195783-1208962 [Contig_View]  LOC100130872 [Vega]
TCGA cBioPortalLOC100130872
AceView (NCBI)LOC100130872
Genatlas (Paris)LOC100130872
WikiGenes100130872
SOURCE (Princeton)LOC100130872
Genetics Home Reference (NIH)LOC100130872
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100130872  -     chr4:1195783-1208962 -  4p16.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100130872  -     4p16.3   [Description]    (hg19-Feb_2009)
EnsemblLOC100130872 - 4p16.3 [CytoView hg19]  LOC100130872 - 4p16.3 [CytoView hg38]
Mapping of homologs : NCBILOC100130872 [Mapview hg19]  LOC100130872 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091779 AK122772 BC030552 BC044945 BC069032
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100130872
Cluster EST : UnigeneHs.302963 [ NCBI ]
CGAP (NCI)Hs.302963
Gene ExpressionLOC100130872 [ NCBI-GEO ]   LOC100130872 [ EBI - ARRAY_EXPRESS ]   LOC100130872 [ SEEK ]   LOC100130872 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100130872 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100130872
GTEX Portal (Tissue expression)LOC100130872
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100130872
DMDM Disease mutations100130872
Blocks (Seattle)LOC100130872
IPIIPI00300905   
Protein Interaction databases
BioGRIDLOC100130872
STRING (EMBL)LOC100130872
ZODIACLOC100130872
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100130872
BioCentury BCIQLOC100130872
ClinGenLOC100130872
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100130872
Clinical trialLOC100130872
Miscellaneous
canSAR (ICR)LOC100130872 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100130872
EVEXLOC100130872
GoPubMedLOC100130872
iHOPLOC100130872
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:47:17 CET 2017

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