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LOC100130976 (uncharacterized LOC100130976)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100130976
Atlas_Id 66449
Location 15q26.2  [Link to chromosome band 15q26]
Location_base_pair Starts at 96828297 and ends at 96832483 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100130976  100130976  uncharacterized LOC100130976
Aliases
GeneCards (Weizmann)LOC100130976
Ensembl hg19 (Hinxton) [Gene_View]  chr15:96828297-96832483 [Contig_View]  LOC100130976 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:96828297-96832483 [Contig_View]  LOC100130976 [Vega]
TCGA cBioPortalLOC100130976
AceView (NCBI)LOC100130976
Genatlas (Paris)LOC100130976
WikiGenes100130976
SOURCE (Princeton)LOC100130976
Genetics Home Reference (NIH)LOC100130976
Genomic and cartography
GoldenPath hg19 (UCSC)LOC100130976  -     chr15:96828297-96832483 -  15q26.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC100130976  -     15q26.2   [Description]    (hg38-Dec_2013)
EnsemblLOC100130976 - 15q26.2 [CytoView hg19]  LOC100130976 - 15q26.2 [CytoView hg38]
Mapping of homologs : NCBILOC100130976 [Mapview hg19]  LOC100130976 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128633
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)AC_000147 NC_000015 NT_010274 NW_001838223
Consensus coding sequences : CCDS (NCBI)LOC100130976
Cluster EST : UnigeneHs.58690 [ NCBI ]
CGAP (NCI)Hs.58690
Gene ExpressionLOC100130976 [ NCBI-GEO ]   LOC100130976 [ EBI - ARRAY_EXPRESS ]   LOC100130976 [ SEEK ]   LOC100130976 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100130976 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100130976
GTEX Portal (Tissue expression)LOC100130976
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZQY7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZQY7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZQY7
Splice isoforms : SwissVarQ6ZQY7
PhosPhoSitePlusQ6ZQY7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100130976
DMDM Disease mutations100130976
Blocks (Seattle)LOC100130976
SuperfamilyQ6ZQY7
Peptide AtlasQ6ZQY7
IPIIPI00443665   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZQY7
IntAct (EBI)Q6ZQY7
BioGRIDLOC100130976
STRING (EMBL)LOC100130976
ZODIACLOC100130976
Ontologies - Pathways
QuickGOQ6ZQY7
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLOC100130976
Atlas of Cancer Signalling NetworkLOC100130976
Wikipedia pathwaysLOC100130976
Orthology - Evolution
OrthoDB100130976
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ6ZQY7
HOGENOMQ6ZQY7
Homologs : HomoloGeneLOC100130976
Homology/Alignments : Family Browser (UCSC)LOC100130976
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLOC100130976 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LOC100130976
dbVarLOC100130976
ClinVarLOC100130976
1000_GenomesLOC100130976 
Exome Variant ServerLOC100130976
ExAC (Exome Aggregation Consortium)LOC100130976 (select the gene name)
Genetic variants : HAPMAP100130976
Genomic Variants (DGV)LOC100130976 [DGVbeta]
DECIPHER (Syndromes)15:96828297-96832483  
CONAN: Copy Number AnalysisLOC100130976 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch LOC100130976
DgiDB (Drug Gene Interaction Database)LOC100130976
DoCM (Curated mutations)LOC100130976 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LOC100130976 (select a term)
intoGenLOC100130976
Cancer3DLOC100130976(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLOC100130976
Genetic Testing Registry LOC100130976
NextProtQ6ZQY7 [Medical]
TSGene100130976
GENETestsLOC100130976
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100130976
BioCentury BCIQLOC100130976
ClinGenLOC100130976
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100130976
Clinical trialLOC100130976
Miscellaneous
canSAR (ICR)LOC100130976 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100130976
EVEXLOC100130976
GoPubMedLOC100130976
iHOPLOC100130976
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:15:44 CET 2017

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