Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC100131047 (uncharacterized LOC100131047)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100131047
Atlas_Id 66457
Location 6p21.2  [Link to chromosome band 6p21]
Location_base_pair Starts at 38906495 and ends at 38953107 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100131047  100131047  uncharacterized LOC100131047
Aliases
GeneCards (Weizmann)LOC100131047
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:38906495-38953107 [Contig_View]  LOC100131047 [Vega]
TCGA cBioPortalLOC100131047
AceView (NCBI)LOC100131047
Genatlas (Paris)LOC100131047
WikiGenes100131047
SOURCE (Princeton)LOC100131047
Genetics Home Reference (NIH)LOC100131047
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100131047  -     chr6:38906495-38953107 -  6p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100131047  -     6p21.2   [Description]    (hg19-Feb_2009)
EnsemblLOC100131047 - 6p21.2 [CytoView hg19]  LOC100131047 - 6p21.2 [CytoView hg38]
Mapping of homologs : NCBILOC100131047 [Mapview hg19]  LOC100131047 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC054098 DB022177
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100131047
Cluster EST : UnigeneHs.670957 [ NCBI ]
CGAP (NCI)Hs.670957
Gene ExpressionLOC100131047 [ NCBI-GEO ]   LOC100131047 [ EBI - ARRAY_EXPRESS ]   LOC100131047 [ SEEK ]   LOC100131047 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100131047 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100131047
GTEX Portal (Tissue expression)LOC100131047
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100131047
DMDM Disease mutations100131047
Blocks (Seattle)LOC100131047
IPIIPI00921410   
Protein Interaction databases
BioGRIDLOC100131047
STRING (EMBL)LOC100131047
ZODIACLOC100131047
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100131047
BioCentury BCIQLOC100131047
ClinGenLOC100131047
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131047
Clinical trialLOC100131047
Miscellaneous
canSAR (ICR)LOC100131047 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100131047
EVEXLOC100131047
GoPubMedLOC100131047
iHOPLOC100131047
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:59:24 CEST 2018

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