Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC100131289 (uncharacterized LOC100131289)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100131289
Atlas_Id 66476
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 27761744 and ends at 27763187 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC100131289  100131289  uncharacterized LOC100131289
Aliases
GeneCards (Weizmann)LOC100131289
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:27761744-27763187 [Contig_View]  LOC100131289 [Vega]
TCGA cBioPortalLOC100131289
AceView (NCBI)LOC100131289
Genatlas (Paris)LOC100131289
WikiGenes100131289
SOURCE (Princeton)LOC100131289
Genetics Home Reference (NIH)LOC100131289
Genomic and cartography
GoldenPath hg38 (UCSC)LOC100131289  -     chr6:27761744-27763187 +  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC100131289  -     6p22.1   [Description]    (hg19-Feb_2009)
EnsemblLOC100131289 - 6p22.1 [CytoView hg19]  LOC100131289 - 6p22.1 [CytoView hg38]
Mapping of homologs : NCBILOC100131289 [Mapview hg19]  LOC100131289 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX090544
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC100131289
Cluster EST : UnigeneHs.200573 [ NCBI ]
CGAP (NCI)Hs.200573
Gene ExpressionLOC100131289 [ NCBI-GEO ]   LOC100131289 [ EBI - ARRAY_EXPRESS ]   LOC100131289 [ SEEK ]   LOC100131289 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC100131289 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100131289
GTEX Portal (Tissue expression)LOC100131289
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC100131289
DMDM Disease mutations100131289
Blocks (Seattle)LOC100131289
Protein Interaction databases
BioGRIDLOC100131289
STRING (EMBL)LOC100131289
ZODIACLOC100131289
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100131289
BioCentury BCIQLOC100131289
ClinGenLOC100131289
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131289
Clinical trialLOC100131289
Miscellaneous
canSAR (ICR)LOC100131289 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC100131289
EVEXLOC100131289
GoPubMedLOC100131289
iHOPLOC100131289
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:59:28 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.